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Report for CCDS25634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25634.1 Public Mus musculus 11 Kctd2 23 108 98 CCDS HistoryNCBI Gene:70382Re-query CCDS DB by CCDS ID:25634.1Re-query CCDS DB by GeneID:70382See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25634.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103035.9 ENSMUSP00000099324.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103035.9Link to Ensembl Protein Viewer:ENSMUSP00000099324.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000103035Re-query CCDS DB by Protein ID:ENSMUSP00000099324
Original member NCBI NM_183285.3 NP_899108.3 Updated not alive Link to Nucleotide Sequence:NM_183285.3Link to Protein Sequence:NP_899108.3Re-query CCDS DB by Nucleotide ID:NM_183285Re-query CCDS DB by Protein ID:NP_899108
Current member NCBI NM_183285.4 NP_899108.3 Accepted alive Link to Nucleotide Sequence:NM_183285.4Link to Protein Sequence:NP_899108.3Re-query CCDS DB by Nucleotide ID:NM_183285Re-query CCDS DB by Protein ID:NP_899108Link to BLAST:NP_899108.3

Chromosomal Locations for CCDS 25634.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 115420168 115420506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 115421983 115422091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 115424484 115424575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 115427433 115427528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 115429280 115429405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 115430313 115430342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGGCGGAGCTGCAGCTGGACCCGGCAGTGGCGGGGCTGGGAGGGGGTGGCAGCAGTGCGATGGGCGACG
GCGGCGGCTCGGGCCGCGGACCCCCCAGCCCTCGCCCTGCGGGCCCGACACCCCGCGGACACGGCCGCCA
GCCCGCCGCCGCCGCGCAGCCGCTGGAGCCCGGGCCCGGACCTCCGGAGCGGACGGGAGGCGGCGGGGCC
GCCCGCTGGGTCCGGCTCAACGTGGGCGGTACCTACTTCGTGACCACCAGACAGACCCTAGGCCGGGAGC
CCAAGTCCTTCCTCTGCCGCCTGTGCTGCCAGGAGGACCCGGAGCTGGACTCCGACAAGGACGAGACTGG
AGCGTATCTGATTGACAGAGACCCTACCTACTTTGGTCCTATCCTAAACTACCTCCGCCATGGGAAACTC
ATCATTACCAAGGAGTTGGCAGAAGAAGGTGTGCTGGAAGAAGCAGAGTTTTACAATATCGCATCTCTCG
TGCGGCTGGTTAAGGAAAGGATACGAGACAATGAGAACAGAACTTCACAAGGCCCCGTGAAGCACGTGTA
CAGGGTCCTGCAGTGTCAAGAGGAAGAGCTCACGCAGATGGTCTCCACTATGTCTGATGGCTGGAAATTT
GAACAGTTAATCAGCATTGGCTCTTCCTATAACTATGGAAATGAAGACCAGGCAGAATTCCTCTGTGTTG
TCTCCAGAGAACTAAATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAAGGCCAAGATTCTTCA
GGAGAGAGGCTCTCGAATGTAA

Translation (263 aa):
MAELQLDPAVAGLGGGGSSAMGDGGGSGRGPPSPRPAGPTPRGHGRQPAAAAQPLEPGPGPPERTGGGGA
ARWVRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILNYLRHGKL
IITKELAEEGVLEEAEFYNIASLVRLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWKF
EQLISIGSSYNYGNEDQAEFLCVVSRELNNSTNGIVIEPSEKAKILQERGSRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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