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Report for CCDS24859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24859.1 Public Mus musculus 11 Rcvrn 23 108 98 CCDS HistoryNCBI Gene:19674Re-query CCDS DB by CCDS ID:24859.1Re-query CCDS DB by GeneID:19674See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24859.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021290.1 ENSMUSP00000021290.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021290.1Link to Ensembl Protein Viewer:ENSMUSP00000021290.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000021290Re-query CCDS DB by Protein ID:ENSMUSP00000021290
Original member Current member NCBI NM_009038.2 NP_033064.1 Accepted alive Link to Nucleotide Sequence:NM_009038.2Link to Protein Sequence:NP_033064.1Re-query CCDS DB by Nucleotide ID:NM_009038Re-query CCDS DB by Protein ID:NP_033064Link to BLAST:NP_033064.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033064.1 202 P34057 202 100% 0 0

Chromosomal Locations for CCDS 24859.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67695417 67695797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67699973 67700084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67702878 67702993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGGGGAACAGCAAGAGCGGTGCCCTGTCCAAGGAGATCCTAGAGGAGTTGCAACTGAACACCAAGTTCA
CAGAGGAGGAGCTGAGTGCCTGGTACCAGTCCTTCCTGAAGGAGTGCCCTAGCGGCCGCATCACGCGGCA
GGAGTTCGAAAGTATCTATTCCAAGTTTTTCCCGGACTCCGACCCCAAGGCCTACGCGCAGCACGTGTTC
CGCAGCTTCGATGCCAACAGCGATGGTACGCTGGACTTCAAGGAGTACGTGATTGCTCTGCACATGACCA
CGGCGGGCAAGCCCACGCAGAAGCTCGAGTGGGCCTTCTCGCTCTACGACGTAGACGGCAATGGGACCAT
CAGCAAAAATGAAGTGCTGGAGATCGTCATGGCTATCTTCAAAATGATCAAGCCTGAGGATGTGAAACTC
CTCCCAGATGATGAAAACACCCCAGAAAAGCGGGCTGAGAAGATCTGGGCATTCTTTGGAAAGAAAGAGG
ATGATAAACTTACAGAGGAGGAATTCATCGAGGGGACCCTGGCCAATAAGGAAATTCTGCGACTGATCCA
GTTTGAACCTCAAAAAGTGAAGGAGAGGATAAAGGAAAAGAAACAGTGA

Translation (202 aa):
MGNSKSGALSKEILEELQLNTKFTEEELSAWYQSFLKECPSGRITRQEFESIYSKFFPDSDPKAYAQHVF
RSFDANSDGTLDFKEYVIALHMTTAGKPTQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMIKPEDVKL
LPDDENTPEKRAEKIWAFFGKKEDDKLTEEEFIEGTLANKEILRLIQFEPQKVKERIKEKKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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