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Report for CCDS24372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24372.1 Public Mus musculus 11 Pes1 23 108 98 CCDS HistoryNCBI Gene:64934Re-query CCDS DB by CCDS ID:24372.1Re-query CCDS DB by GeneID:64934See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24372.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020705.4 ENSMUSP00000020705.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020705.4Link to Ensembl Protein Viewer:ENSMUSP00000020705.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000020705Re-query CCDS DB by Protein ID:ENSMUSP00000020705
Original member Current member NCBI NM_022889.3 NP_075027.1 Accepted alive Link to Nucleotide Sequence:NM_022889.3Link to Protein Sequence:NP_075027.1Re-query CCDS DB by Nucleotide ID:NM_022889Re-query CCDS DB by Protein ID:NP_075027Link to BLAST:NP_075027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075027.1 584 Q9EQ61 584 100% 0 0

Chromosomal Locations for CCDS 24372.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3964037 3964060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3968263 3968342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3969433 3969586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3970625 3970734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3973197 3973368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3973449 3973538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3975529 3975645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3975740 3975814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3976035 3976121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3976288 3976418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3976772 3976897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3977016 3977200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3977626 3977783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3977871 3978032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3978827 3978910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1755 nt):
ATGGGAGGTCTGGAGAAGAAGAAGTATGAACGAGGCTCTGCCACCAATTATATCACCCGAAACAAGGCCA
GGAAGAAGCTGCAGCTGAGCCTGCCTGACTTCAGGCGGCTGTGCATCCTGAAAGGTATTTATCCTCACGA
ACCCAAGCATAAGAAGAAAGTTAACAAGGGTTCCACAGCAGCCCGGACATTTTACCTTATCAAAGACATT
AAATTCCTCCTCCATGAGCCCATCGTCAACAAGTTCCGAGAGTACAAGGTGTTTGTTCGGAAGCTCCGCA
AAGCCTATGGAAAGAGCGAATGGAATGCTGTGGAGCGCCTGAAGGACAATAAACCCTGCTACAAACTTGA
CCACATTGTCAAGGAGCGGTACCCCACATTTATCGATGCTCTGCGGGACCTCGATGATGCCCTGTCAATG
TGCTTCCTCTTCTCCACCTTCCCTCGGACTGGCAAGTGTCATGTGCAGACCATTCAGTTGTGCCGTAGGC
TCACTGTGGAGTTCCTGCACTATGTCATCACTGCCCGAGCCCTGCGCAAGGTCTTCCTGTCCATTAAAGG
CATTTATTATCAGGCTGAGGTGCTGGGTCAGCCCATCGTATGGATTGCACCCTATGCTTTCTCCCATGAT
CATCCGACAGATGTGGACTACAGGGTCATGGCCACCTTCACTGAGTTCTATACCACGCTCCTGGGCTTTG
TCAACTTCCGTCTCTACCAGTCACTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGA
GACAAAGATCAGCGAGGACACATATGCATTGGACTCTGAGAGCTCTATGGAGAAACTGGCTGCCCTCAGT
GCCAGCCTGGCCCGAGTGGTGGTGCCTGCTATAGAGGAGGCTGAGGCTGATGAATTCCCTACTGATGGGG
AGGTGACAGCACAGGAGGAAGATCGGAAGAAAGAGCTGGAGGCACAGGAAAAGCACAAGAAACTCTTTGA
AGGCCTGAAGTTCTTCCTGAACCGAGAGGTGCCCCGTGAAGCATTGGCCTTCATCATCAGGAGTTTTGGT
GGGGATGTATCCTGGGACAAGTCTCTGTGTATCGGAGCCACCTATGACGTCACAGACTCATGCATCACCC
ACCAGATTGTTGACCGGCCGGGGCAGCAAACCCCCATCATTGGCAGGTACTATGTACAGCCCCAGTGGGT
CTTTGACTGTGTGAATGCCCGGCTCCTCCTCCCTGTGGCAGAGTACTTCCCCGGGATGCAGCTGCCCCCA
CATCTTTCACCCTTCGTATCTGAGAAGGAAGGAGATTACATTCCCCCTGAGAAGCTGAAGCTCCTGGCTC
TGCAGCGGGGAGAAGACCCAGGACACTTGGAAGAGGAGGAGGAGGAGGATGAAGATGATGACAACGAAGG
TGATGTTGCAGCGGAAAATGAAGAGGAAGATGTGGAAGTTGAATCGGAGGAGGAGGAGGAGGAGGAGGTG
CACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCAGGTTATGGCCGGCACTGTGAAGC
TGGAAGACAAGCAGCGGCTGGCCCAGGAGGAAGAGAGTGAGGCTAAGCGCTTGGCCATCATGATGATGAA
AAAGCGAGAGAAGTACCTTTACCAAAAGATCATGTTTGGCAAGCGGCGCAAAATCCGAGAGGCCAACAAG
CTGGCAGAGAAGAGGAAAGCCCATGATGATGCTGTGAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCG
TGTGA

Translation (584 aa):
MGGLEKKKYERGSATNYITRNKARKKLQLSLPDFRRLCILKGIYPHEPKHKKKVNKGSTAARTFYLIKDI
KFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNAVERLKDNKPCYKLDHIVKERYPTFIDALRDLDDALSM
CFLFSTFPRTGKCHVQTIQLCRRLTVEFLHYVITARALRKVFLSIKGIYYQAEVLGQPIVWIAPYAFSHD
HPTDVDYRVMATFTEFYTTLLGFVNFRLYQSLNLHYPPKLEGQAQAETKISEDTYALDSESSMEKLAALS
ASLARVVVPAIEEAEADEFPTDGEVTAQEEDRKKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFG
GDVSWDKSLCIGATYDVTDSCITHQIVDRPGQQTPIIGRYYVQPQWVFDCVNARLLLPVAEYFPGMQLPP
HLSPFVSEKEGDYIPPEKLKLLALQRGEDPGHLEEEEEEDEDDDNEGDVAAENEEEDVEVESEEEEEEEV
HLSALEQHRLEEKKPQVMAGTVKLEDKQRLAQEEESEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANK
LAEKRKAHDDAVRSEKKAKRTRPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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