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Report for CCDS23493.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23493.1 Public Mus musculus 9 Zmynd10 23 108 98 CCDS HistoryNCBI Gene:114602Re-query CCDS DB by CCDS ID:23493.1Re-query CCDS DB by GeneID:114602See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23493.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000010188.8 ENSMUSP00000010188.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000010188.8Link to Ensembl Protein Viewer:ENSMUSP00000010188.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000010188Re-query CCDS DB by Protein ID:ENSMUSP00000010188
Original member Current member NCBI NM_053253.4 NP_444483.2 Accepted alive Link to Nucleotide Sequence:NM_053253.4Link to Protein Sequence:NP_444483.2Re-query CCDS DB by Nucleotide ID:NM_053253Re-query CCDS DB by Protein ID:NP_444483Link to BLAST:NP_444483.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444483.2 440 Q99ML0 440 100% 0 0

Chromosomal Locations for CCDS 23493.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107547457 107547548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107547800 107547908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107548670 107548786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107548880 107548933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107549028 107549165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107549280 107549368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107549466 107549566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107549875 107550047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107550284 107550409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107550498 107550619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107550740 107550865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107550961 107551036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1323 nt):
ATGGGTGACCTGGAACTGCTGCTGCCTGGGGAGGCTGAGGTGCTGGTGCGGGGCCTGCGCAGCTTCCAGC
TTCGGGAGATGGGCTCTGAAGGGTGGAATAAGCAGCATGAGAGCCTGGAGAAGCTGAACATGCAAGCCAT
CCTTGATGCAACTATCAGCCAGGCTGAGCCCATCCAGGAACTGCTAATCAACCATGGGAAGATCCCAACG
CTGGTGGAGGAGCTGATTGCGGTGGAGATGTGGAAACAGAAGGTTTTCCCTGTGCTGTGCCGGCTGGAGG
ACTTCAAGCCCCAGAATACCTTCCCCATATACATGGTGGTACACCATGAGGCCTCCATCATCAATCTCCT
AGAGACAGTGTTCTTCCACAAGGAGGTGTGTGAGTCAGCTGATGACAAGGTCTTGGACCTAGTAGACTAT
TGCCACCGCAAGCTGATACTGCTAGTGGCCCGGAAAGGCGGTGGTGACCTGTCTGAAGAAGAACAGTTCC
AGGACAGTACCCCTATGCAAGAGCTGCAAAAGCAGGCGGAGATGATGGAATTTGAGATATCCCTGAAAGC
CCTCTCGGTGCTTCGCTACATCACAGACTGCGTGGATAGCCTTTCCCTGAGCACACTGAACCGCATGCTC
AGGACTCACAACTTGCCCTGCCTCTTGGTGGAACTGCTGGAGCACAGTCCCTGGAGCCGGCGGGTAGGAG
GCAAGCTGCAGCATTTTGAGAGTGGCCGATGGCAGACGGTGGCCCCCTCAGAGCAGCAAAAGCTGAATAA
ACTGGATGGGCAAGTATGGATCGCCCTGTACAATCTACTGCTCAGCCCTGAGGCCCGAGCCCGTTACTGC
CTTACAAGCTTTGCCAAGGGACAGCTGCTTAAGCTTCAGGCCTTCCTCACTGACACACTACTCGACCAGT
TGCCCAATCTTGCCGATCTGAAGGGTTTCCTGGCCCACCTGTCCCTGGCTGAAACCCAGCCCCCTAAGAA
GGACCTAGTGTTAGAACAGATCCCAGAAATCTGGGATCGCCTGGAGAGAGAGAACAAAGGGAAATGGCAG
GCTATCGCCAAGCACCAGCTTCAGCACGTATTCAGCCTCTCGGAGAAGGATCTTCGTCAACAAGCACAGA
GGTGGGCTGAAACCTACAGGCTGGATGTCCTAGAGGCAGTAGCTCCGGAGAGGCCCCGCTGCGGCTACTG
CAACGCAGAGGCCTCCAAGCGCTGCTCCAGATGCCAGAATGTGTGGTATTGCTGCAGGGAGTGTCAAGTC
AAGCACTGGGAGAAGCACGGAAAGACATGTGTTCTAGCAGCCCAAGGTGACAGAGCCAAGTGA

Translation (440 aa):
MGDLELLLPGEAEVLVRGLRSFQLREMGSEGWNKQHESLEKLNMQAILDATISQAEPIQELLINHGKIPT
LVEELIAVEMWKQKVFPVLCRLEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESADDKVLDLVDY
CHRKLILLVARKGGGDLSEEEQFQDSTPMQELQKQAEMMEFEISLKALSVLRYITDCVDSLSLSTLNRML
RTHNLPCLLVELLEHSPWSRRVGGKLQHFESGRWQTVAPSEQQKLNKLDGQVWIALYNLLLSPEARARYC
LTSFAKGQLLKLQAFLTDTLLDQLPNLADLKGFLAHLSLAETQPPKKDLVLEQIPEIWDRLERENKGKWQ
AIAKHQLQHVFSLSEKDLRQQAQRWAETYRLDVLEAVAPERPRCGYCNAEASKRCSRCQNVWYCCRECQV
KHWEKHGKTCVLAAQGDRAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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