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Report for CCDS23397.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23397.1 Public Mus musculus 9 Ankrd34c 23 108 98 CCDS HistoryNCBI Gene:330998Re-query CCDS DB by CCDS ID:23397.1Re-query CCDS DB by GeneID:330998See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23397.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060700.3 ENSMUSP00000056787.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060700.3Link to Ensembl Protein Viewer:ENSMUSP00000056787.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000060700Re-query CCDS DB by Protein ID:ENSMUSP00000056787
Original member Current member EBI ENSMUST00000185470.2 ENSMUSP00000140919.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000185470.2Link to Ensembl Protein Viewer:ENSMUSP00000140919.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000185470Re-query CCDS DB by Protein ID:ENSMUSP00000140919
Original member Current member NCBI NM_207260.2 NP_997143.1 Accepted alive Link to Nucleotide Sequence:NM_207260.2Link to Protein Sequence:NP_997143.1Re-query CCDS DB by Nucleotide ID:NM_207260Re-query CCDS DB by Protein ID:NP_997143Link to BLAST:NP_997143.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997143.1 534 Q8BLB8 534 100% 0 0

Chromosomal Locations for CCDS 23397.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 89728682 89730286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1605 nt):
ATGATGGATGATGACACTGAGTTGAGGACTGATGGAAACTCTCTCTTAAAAGCTGTGTGGCTAGGGAGGC
TTCGGTTGACCAGACTCCTCTTAGAAGGGGGAGCTTACATCAATGAAAGCAATGACAAAGGAGAAACAGC
TCTCATGGTGGCATGCATTACCAAACACGTGGACCAGCAAAGCATTAGCAAGTCTAAGATGGTGAAATAT
CTGTTGGACAACAGGGCAGACCCCAATATCCAGGATAAGTCTGGTAAGACTGCGCTCATCCATGCTTGCA
TCAGAAGGGCTGGGGGAGAAGTGGTGTCCTTACTGCTGGAAAATGGAGCAGACCCCAGTCTTGAGGATCG
AACTGGGGCCTCAGCTCTGGTTTATGCAATAAATGCAGATGACAAGGATGCACTGAAACATCTCCTTGAT
GCCTGCAAAGCCAAAGGTAAGGAAGTGATTATTATAACAACAGACAAATCATCTTCAGGCACCAAAACCA
CCAAGCAGTATCTCAATGTCCCTCCATCACCCAAAGTGGAAGATAGACAGTCACCACCACTGTGTACAAC
TCCTTCTGATGTTGAACTGAAGACTTCTGGCCTGGCTTCTCCACCCAGTGAAAAGGATGATGACTTCTTC
ATCCTGCAGACAGGACACCAAAGTGGCTGTAGCACTTCTAAGGTCCTTAATGAGCCTGGATCACCCACCA
GGAAAGTGTCTAGCCTCAAAAGGGCCCGTTTGCCCCAATTGAAACGACTCCAGTCTGAACCCTGGGGCTT
GATTGCTCCTTCTGTGCTGGCTGCTGCCACACGCCAGGATGAGACCCATGGCACAAGCACAGACAATGAG
GTCATCAGGAGCATCAATGATGTGACCTTCCCTAAAAGGGGGCCCCTCTCCAGAACCAACAGCATTGACA
GTAAAGACCCTACCCTCTTCCCCACAGTCCAGGAACAAGTTCTGAAGGTTTCAGCTTCAACACCAGCTTC
GTGGAAAGCAGCTTATGAGAAAGGCCAGGCTCCCCATCCACGCCTGGCCAGGAGAGGAACGCTTCCTCTT
GACCAAGAAAAGAGTGGGATGTGTCCACCAGGACCCTCAACTCTGAAAGATCCAGCATCTCTCAAGCTGT
TGGAAAATGACCTATATGACTTAGACATACAGCCAGTGGGTGACCCACCCAACTCTATGTCCCTTGAGTC
AGGCAAAGGACCTTTAGATAGAAAGAAGCTCAACAGCTCCCACTTGTCTCTTTTCCATGGCTCCCGGGAG
TCCCTGGAAGTTGTACCAAGCACATCTCCCACCTCAGTTCGCCGCAGGCCACCTCATCTCCTAGAAAGAA
GAGGTTCTGGAACTCTCTTACTCGACCGCATTGCTCACACGAGGCCTGGCTTTCTGCCCCCTTTAAATGT
GAATTTAAATCCACCTATCCCAGATATTAGAGCCAGCAGCAAACCAGCTTCCCCACTTGCTAGTGGCTTA
AAATCTATGGCTCCTGTTGCTCCAAATTCACCAAAGAGAGTTGACTTGAGAAGTAAAAAGAAACTCCTTC
GAAGACATTCTATGCAGATTGAGCAGATGAAGCAGCTGTCTGACTTTGAAGAAATCATGGCTTAG

Translation (534 aa):
MMDDDTELRTDGNSLLKAVWLGRLRLTRLLLEGGAYINESNDKGETALMVACITKHVDQQSISKSKMVKY
LLDNRADPNIQDKSGKTALIHACIRRAGGEVVSLLLENGADPSLEDRTGASALVYAINADDKDALKHLLD
ACKAKGKEVIIITTDKSSSGTKTTKQYLNVPPSPKVEDRQSPPLCTTPSDVELKTSGLASPPSEKDDDFF
ILQTGHQSGCSTSKVLNEPGSPTRKVSSLKRARLPQLKRLQSEPWGLIAPSVLAAATRQDETHGTSTDNE
VIRSINDVTFPKRGPLSRTNSIDSKDPTLFPTVQEQVLKVSASTPASWKAAYEKGQAPHPRLARRGTLPL
DQEKSGMCPPGPSTLKDPASLKLLENDLYDLDIQPVGDPPNSMSLESGKGPLDRKKLNSSHLSLFHGSRE
SLEVVPSTSPTSVRRRPPHLLERRGSGTLLLDRIAHTRPGFLPPLNVNLNPPIPDIRASSKPASPLASGL
KSMAPVAPNSPKRVDLRSKKKLLRRHSMQIEQMKQLSDFEEIMA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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