NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS22775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22775.1 Public Mus musculus 8 2810004N23Rik 23 108 98 CCDS HistoryNCBI Gene:66523Re-query CCDS DB by CCDS ID:22775.1Re-query CCDS DB by GeneID:66523See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22775.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034465.8 ENSMUSP00000034465.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034465.8Link to Ensembl Protein Viewer:ENSMUSP00000034465.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034465Re-query CCDS DB by Protein ID:ENSMUSP00000034465
Original member Current member NCBI NM_025615.2 NP_079891.2 Accepted alive Link to Nucleotide Sequence:NM_025615.2Link to Protein Sequence:NP_079891.2Re-query CCDS DB by Nucleotide ID:NM_025615Re-query CCDS DB by Protein ID:NP_079891Link to BLAST:NP_079891.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079891.2 281 Q8CIL4 281 100% 0 0

Chromosomal Locations for CCDS 22775.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124839834 124839966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124840448 124840506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124841294 124841380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124841687 124841782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124842363 124842419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124860946 124861271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124862885 124862972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (846 nt):
ATGGCGGCGGAGCACGATTCGGACTCCGTTGAGCCTCCTGGTTCGGAGGCACTCCTGGACGCCGTTCTGC
GGACCCTCTACGACCTGGGAGAGACGGAAGGTGAAACAGAGCAGAAAAGGATCCGAAAGAAGAAAGCAAA
GAAGAGAGACTCAGAGACTATAGAAGATGTGGCAGTAGAGCCGCTTCCCCTGCCTGGATCTCCTGTACGA
GGCCAGAAGAAGAGTGCTTCCAGCTTTTTCCAGAAGCTCAGAGAAGAACTGCAGTCTGCTCCCGCTGCCC
CTTCAGAAGTCCCTGTCACTACTGCAGTCTCCCTCTCTCCCCCAAAGAACGGCAGCAAGCTAGTGGAAGT
GGTAGAGTTTCAAAGCAAAAGTAAAAAGAGAAAACTAAAGTCAGATGAAGATGAGCCGGCAAAGAATAAA
ACAAAGGTCGTTAAAAAAGATGTGGATATTCAGGAGTTTAACCTAGAAAAGGCTCGTCTGGAAGTACACC
GCTTTGGGATCACGGGCTATGGCAAAGGAAAAGAAAGAGTCCTGGAGCGGGAGCGAGCTATCATGCTGGG
GGCTAAGCCTCCCAAGAACACTTACGTGAACTACAAGGTTTTGCAGAAACAAATCAAAGAGAAGAAGATC
GCAGTGGAAGAAGAAAAGAGAGCGGCCCGGGAGACAGACATTTTCAAGAAAAAGAAGAAGAAAGGGAGAG
GGCAGGAGGACAGGAGATCCAAAAAGTCGGCTCCCAGCATCTTGTCAAGTGGACAAGTTGGACAAGTTGG
AAAATTCAGAAATGGAACATTGATTCTAAGCCCCACTGATATCAAGAAAATCAACTCTTCCAGGGTAGCT
AAATGA

Translation (281 aa):
MAAEHDSDSVEPPGSEALLDAVLRTLYDLGETEGETEQKRIRKKKAKKRDSETIEDVAVEPLPLPGSPVR
GQKKSASSFFQKLREELQSAPAAPSEVPVTTAVSLSPPKNGSKLVEVVEFQSKSKKRKLKSDEDEPAKNK
TKVVKKDVDIQEFNLEKARLEVHRFGITGYGKGKERVLERERAIMLGAKPPKNTYVNYKVLQKQIKEKKI
AVEEEKRAARETDIFKKKKKKGRGQEDRRSKKSAPSILSSGQVGQVGKFRNGTLILSPTDIKKINSSRVA
K


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH