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Report for CCDS22774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22774.1 Public Mus musculus 8 Arv1 23 108 98 CCDS HistoryNCBI Gene:68865Re-query CCDS DB by CCDS ID:22774.1Re-query CCDS DB by GeneID:68865See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034463.3 ENSMUSP00000034463.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034463.3Link to Ensembl Protein Viewer:ENSMUSP00000034463.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034463Re-query CCDS DB by Protein ID:ENSMUSP00000034463
Original member Current member NCBI NM_001368372.1 NP_001355301.1 Accepted alive Link to Nucleotide Sequence:NM_001368372.1Link to Protein Sequence:NP_001355301.1Re-query CCDS DB by Nucleotide ID:NM_001368372Re-query CCDS DB by Protein ID:NP_001355301Link to BLAST:NP_001355301.1
Original member Current member NCBI NM_026855.5 NP_081131.1 Accepted alive Link to Nucleotide Sequence:NM_026855.5Link to Protein Sequence:NP_081131.1Re-query CCDS DB by Nucleotide ID:NM_026855Re-query CCDS DB by Protein ID:NP_081131Link to BLAST:NP_081131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355301.1 266 Q9D0U9 266 100% 0 0
NP_081131.1 266 Q9D0U9 266 100% 0 0

Chromosomal Locations for CCDS 22774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124722184 124722342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124725256 124725375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124728329 124728482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124730792 124731016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124731797 124731939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGGGACCGGCGGGCGTAGGGGGACGCGGTCCGGGAAAGGCACGGAAGGCGCAGCGGCGACTTCTTCCT
CTTGCCTGTATCGTTGTATCGAGTGCAACCGAGAGGCTCAGGAGCTGTACCGGGACTACAGCCACGGCGT
GCTCAAGATAACCATCTGCAAATCCTGCCAGAAACCAGTAGACAAATACATCGAATACGACCCTGTTATT
ATCTTGATTAATGCCATTTTATGCAAAACTCAGGCCTACAGGCATATTCTTTTCAACACTAAAATAAATA
TCCATGGGAAACTCTGCATGTTTTGTTTGCTTTGTGAAGCATACCTGCGGTGGTGGCAGCTGCAGGACTC
GAGCCAGAGTCCAGCCCCCGATGACGTGATCCGGTACGCCAAGGAGTGGGACTTCTACAGGATGTTTGTG
ATCGCTTCTTTCGAACAAGCTGCCTTTCTTACTGGCATATTTGCTTTCCTGTGGGTACAGCAACCCATGA
CAGCAAAAAGAGCACCCGACTTTGTTCTGCTGCTGAAAGCACTGTTGCTGTCCAGCTACGGGAAGCTCCT
GCTAATCCCGGCCGTCATCTGGGAACATGACTACACACCTCTGTGTCTCAGGCTCATTAAAGTGTTTGTC
CTGACCTCAAATTTCCAGGCAGTCAGAGTGACCCTGAACACAAACCGGAGGCTCTCCCTGTTGGTCGTGC
TAAGTGGCTTACTGCTGGAGAGCATTGTGGTCTTCTTCTTCCAGAGGATGGAGTGGGATGTGAGCAGTGA
CTGTGCGCTCTACAAGTCTCAGGACTTCTGA

Translation (266 aa):
MGTGGRRGTRSGKGTEGAAATSSSCLYRCIECNREAQELYRDYSHGVLKITICKSCQKPVDKYIEYDPVI
ILINAILCKTQAYRHILFNTKINIHGKLCMFCLLCEAYLRWWQLQDSSQSPAPDDVIRYAKEWDFYRMFV
IASFEQAAFLTGIFAFLWVQQPMTAKRAPDFVLLLKALLLSSYGKLLLIPAVIWEHDYTPLCLRLIKVFV
LTSNFQAVRVTLNTNRRLSLLVVLSGLLLESIVVFFFQRMEWDVSSDCALYKSQDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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