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Report for CCDS22625.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22625.1 Public Mus musculus 8 Dpep2 23 108 98 CCDS HistoryNCBI Gene:319446Re-query CCDS DB by CCDS ID:22625.1Re-query CCDS DB by GeneID:319446See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22625.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000227363.1 ENSMUSP00000154250.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000227363.1Link to Ensembl Protein Viewer:ENSMUSP00000154250.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000227363Re-query CCDS DB by Protein ID:ENSMUSP00000154250
Original member Current member NCBI NM_176913.4 NP_795887.2 Accepted alive Link to Nucleotide Sequence:NM_176913.4Link to Protein Sequence:NP_795887.2Re-query CCDS DB by Nucleotide ID:NM_176913Re-query CCDS DB by Protein ID:NP_795887Link to BLAST:NP_795887.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795887.2 578 Q8C255-2 578 100% 0 0

Chromosomal Locations for CCDS 22625.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105985057 105985281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105985394 105985529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105986181 105986237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105986443 105986494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105988084 105988168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105988679 105988855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105988952 105989021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105989242 105989373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105989450 105989598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105989892 105990018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105990596 105990910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105996183 105996394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGGCCTGGCATGGAGAGACATACTGCCTGATTGGAGGCTACCGTGTCTACGGAGATGCGCCGCTTCCCA
CACCTGCAAAGGCTGAGCAAGAGGAGAAGCCAGTGCCCAGGCGGGCTCCCAAGAGACAGCGAGTTCAGGA
AGAATCGGATCAAGATCTAGGCTGTCCCGGTGCAAAAGTTCCTCGCCTGAAATTGAAGCATGGTGGCAAA
GGGCTTTCGCGACCCTCATCCGTGCCGGCTTGCTCCGCCCTGAGCAAGATGTCGCTCACGGGCCTCAAGG
GTCATTGGGTGCTTGGCCATGGGCTTTCAGTGTTCCTGTTGGTGCTGCTGCTGTTAGGGCCTTCACAGCC
TCTAATATGGACCCAGACAAAACCAGGCTTCTCTGGTGCTTCCACTACATCAAGCATCCCCAGAGCACTC
ACCAAGCCCGACATTTCCAGCATTCCAACCACTCCTGGCAACCCCAATTTCCCAGACCTGCGAGATCGCG
CAAGAGCTCTGATGCAGGAGTTCCCGCTTATAGATGGCCACAATGACATGCCTCTTGTCCTGAGACAATT
TTACCAGAATGGACTACAAGATGCTAACCTGAGAAACTTCACCCATGGCCAGACCAGCCTGGATAGGCTT
AAAGATGGCTTGGTGGGAGCCCAGTTCTGGTCTGCTTACGTACCATGCCAGACGCAGGACCGGGATGCCC
TGCGTCTCACTCTGGAGCAGATAGACCTCATTCGCAGAATATGTGCCTCTTATTCTGAGCTGGAACTTGT
GACCTCAGTTAAAGTTAAGTGGATTTATTCAGGCACCCAGAAATTGGCTTGCCTCATTGGTGTGGAAGGT
GGCCATTCACTAGACAACAGCCTCGCTGTGCTTCGAAGTTTCTACCTGCTGGGGGTGCGCTACCTGACGC
TCACACACACCTGCAACACACCCTGGGCAGAGACCTCATCCAAGGGTGTCCACGCATTCTACAGCAGTGT
CACTGGACTGACCAGCTTTGGTGAGAAGGTGGTGGCAGAAATGAATCGCTTAGGTATGATGGTTGATCTG
TCCCACGTCTCGGATGCTGCAGCCAGGCGGGCCTTGGAAGTATCCCAAGCCCCTGTGATTTTCTCCCACT
CCGCTGCCAGGGCTGTGTGCCCAAATGCTCGGAATCTTCCTGATGACCTCCTGCAGCTTCTGAAGAAGAA
CGGTGGCATCGTGATGGTGACCTTCTCCGTAGGAGTGTTACCGTGCAACCCTTTAGCCAATGTATCCACT
GTGGCAGAGAAAGGTCAGCAGAAGCACCAGTTTACTCCACCCAGAGACACACACTTCGTGTCAGTCATCG
GATCCGAGTTCATCGGAATTGGCGGAGATTATGATGGTACCAAACAGTTCCCTCAGGGCCTGGAGGATGT
GTCTACATACCCAGTGCTCATAGAGGAGTTGCTGAGACGAGGCTGGAATGAACAGGAACTCCAAGGCATC
CTTCGAGGAAACCTGCTTCGGGTCTTCCGACAAGTGGAGCAGGTCCGAGACAAAAGCAAATGGCAAAGTC
CCCTGGAAGACATGATCCCAGAGGAGCAGCTGGACAGTGCTTGCCACTCAGCCCTGCGACCTCAGAAACA
GCATCCAGAAAAGAACCAACCGGAGACTCCAGAATATCATATACTCAAGTTCTCACACTCGAAATCCTCT
CCCCACATTGTCCCAAGCCTCGCCATTGTTGCGACCTTATTAGGCCTTATTGTGTGA

Translation (578 aa):
MAWHGETYCLIGGYRVYGDAPLPTPAKAEQEEKPVPRRAPKRQRVQEESDQDLGCPGAKVPRLKLKHGGK
GLSRPSSVPACSALSKMSLTGLKGHWVLGHGLSVFLLVLLLLGPSQPLIWTQTKPGFSGASTTSSIPRAL
TKPDISSIPTTPGNPNFPDLRDRARALMQEFPLIDGHNDMPLVLRQFYQNGLQDANLRNFTHGQTSLDRL
KDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRICASYSELELVTSVKVKWIYSGTQKLACLIGVEG
GHSLDNSLAVLRSFYLLGVRYLTLTHTCNTPWAETSSKGVHAFYSSVTGLTSFGEKVVAEMNRLGMMVDL
SHVSDAAARRALEVSQAPVIFSHSAARAVCPNARNLPDDLLQLLKKNGGIVMVTFSVGVLPCNPLANVST
VAEKGQQKHQFTPPRDTHFVSVIGSEFIGIGGDYDGTKQFPQGLEDVSTYPVLIEELLRRGWNEQELQGI
LRGNLLRVFRQVEQVRDKSKWQSPLEDMIPEEQLDSACHSALRPQKQHPEKNQPETPEYHILKFSHSKSS
PHIVPSLAIVATLLGLIV


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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