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Report for CCDS22554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22554.1 Public Mus musculus 8 Adgrg3 23 108 98 CCDS HistoryNCBI Gene:54672Re-query CCDS DB by CCDS ID:22554.1Re-query CCDS DB by GeneID:54672See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22554.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051259.9 ENSMUSP00000051079.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051259.9Link to Ensembl Protein Viewer:ENSMUSP00000051079.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051259Re-query CCDS DB by Protein ID:ENSMUSP00000051079
Original member Current member NCBI NM_173036.3 NP_766624.3 Accepted alive Link to Nucleotide Sequence:NM_173036.3Link to Protein Sequence:NP_766624.3Re-query CCDS DB by Nucleotide ID:NM_173036Re-query CCDS DB by Protein ID:NP_766624Link to BLAST:NP_766624.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766624.3 542 Q8R0T6 542 100% 0 0

Chromosomal Locations for CCDS 22554.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95017769 95017820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95020933 95021083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95033358 95033493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95034950 95035096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95035810 95035944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95036441 95036480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95036600 95036691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95036826 95036938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95039409 95039689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95039850 95039943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95040260 95040534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95044405 95044517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1629 nt):
ATGGCGACAGCCAGGAGTCTGGGCCTCCTGTTCTTTCTGCTGCTGACTTCAGATGAGGAGACCACGGAAG
AGCCGAGGAATGTCTGCCGTCGGCTTCAGGAGGGCCACGAGTATGACACCTTCGACTTGAATGACACTGC
TCAGTGTTTCACCAAGTGTGGGCAATCGGAGCACAGCCCCTGTGACGTGGGGAACCTGCAGAGATACTGG
TTGAACTATGAGTCCTACCTGCTGGAGAATTCCATGGAGACTGTGGACATGCCTTTTGTTAAGGCATTGA
TCCAGAACATCAGCACGGATGTCTCAGAAGACCTGCTGTACTCTCTGATGCTTTCCCAGATCCCGAGGCA
GGTGATGCAGGGTGAGGACGAGCCTGCTGATGGAGTCCGACTTCCCAAGAGCCTGTTTGGAGCCCTGCCT
GGCAACAGGTCTGCAGTCCGGTTGGCCATAACTGTTCTAGACATTGGTGCAGGGAATGTCTTTAAGGGCC
CCAAGCTCCTTGAGGACAAGGGCAGCAGCGTGTTGAACAACCGCATGGTGGGTTTGAGCGTGGGCCAGAT
GCACGCCACCGGGCTGTCGGAACCTGTAGAGATCACCTTCTCCCATGAGCGTCAACCACCTAACGTGATC
CTCACCTGTGTATTCTGGGATATGGCTAAAGGAGACTGGGATTCCCACGGCTGCTCCACGGTGCCCGGGG
ATGGGAGAACTGTCTGCCGTTGCGACCACTTGACCTTCTTCGCCTTGCTGCTGAGGCCGATCTTGGACCT
GGCCACGGCACAGACTCTCACTCGCATCTCCCAGGCAGGCAGTGCCGTCTCCATGATCTTCCTGGCCTTC
ACCATGGTGCTCTATGTTGCCTTCAGGTTCTCTCTGCAGAGGTTCAAGTCTGAAGATGCCCCTAAGATCC
ACATGGCTCTGAGCATCAGCCTGTTTCTCCTGAATCTTACCTTCCTGATCAATGTGGGGAGCAGCTCCCA
AGGCCCCCCAGCCTCCTGCTGGGTCCGAGCTGCCATTTTCCACTACTTTCTGCTCTGTGTCTTCACCTGG
ATGGGTCTGGAGGCCTTCCACCTCTACCTGCTGGCCATCAGAGTCTTCAATACCTACTTTGGACACTATT
TCCTGAAGCTGAGCCTGCTGGCCTGGGGCCTGCCTGTTCTTGTAGTTATTGGTGCTGGAAGTAGCAACAG
TTATGGAGTTTACACCATTCGCGACCAGGAGAACCGCACATCACTGGAGTTGTGCTGGTTCCAGAAAGAG
CCTGCTCTTTATGCTACTGTCCACGGCTACTTCCTTGTTACCTTCCTCTTCGGTGCTGTGGTACTGGCTT
TGGTGGCCTGGAAGATCTTCACTCTGCCCAGTGTCACAGCGGGCAAAGGACAGGGGCCGACCTGGAAGTC
GGTCCTCACCGTGCTGGGCCTCTCCAGTCTGGTGGGCATGACCTGGGGGCTGGCTGTTCTCACCCCCCTC
GGCTTGTCTACCATCTACGTCTTCACCCTCTTAAACTCTCTACAAGGGCTCTTCATCTTCTGCTGGTTCA
TCATCCTCTACTTCCCTACTCAGAGCACCACAGCCTCCTCCTCCGGCACCGCCCGCCTGGACCAGGCCCA
CTCCGTGTCCCAGGAGTAG

Translation (542 aa):
MATARSLGLLFFLLLTSDEETTEEPRNVCRRLQEGHEYDTFDLNDTAQCFTKCGQSEHSPCDVGNLQRYW
LNYESYLLENSMETVDMPFVKALIQNISTDVSEDLLYSLMLSQIPRQVMQGEDEPADGVRLPKSLFGALP
GNRSAVRLAITVLDIGAGNVFKGPKLLEDKGSSVLNNRMVGLSVGQMHATGLSEPVEITFSHERQPPNVI
LTCVFWDMAKGDWDSHGCSTVPGDGRTVCRCDHLTFFALLLRPILDLATAQTLTRISQAGSAVSMIFLAF
TMVLYVAFRFSLQRFKSEDAPKIHMALSISLFLLNLTFLINVGSSSQGPPASCWVRAAIFHYFLLCVFTW
MGLEAFHLYLLAIRVFNTYFGHYFLKLSLLAWGLPVLVVIGAGSSNSYGVYTIRDQENRTSLELCWFQKE
PALYATVHGYFLVTFLFGAVVLALVAWKIFTLPSVTAGKGQGPTWKSVLTVLGLSSLVGMTWGLAVLTPL
GLSTIYVFTLLNSLQGLFIFCWFIILYFPTQSTTASSSGTARLDQAHSVSQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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