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Report for CCDS22301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22301.1 Public Mus musculus 8 Wwc2 23 108 98 CCDS HistoryNCBI Gene:52357Re-query CCDS DB by CCDS ID:22301.1Re-query CCDS DB by GeneID:52357See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22301.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057561.8 ENSMUSP00000056121.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057561.8Link to Ensembl Protein Viewer:ENSMUSP00000056121.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000057561Re-query CCDS DB by Protein ID:ENSMUSP00000056121
Original member Current member NCBI NM_133791.5 NP_598552.2 Accepted alive Link to Nucleotide Sequence:NM_133791.5Link to Protein Sequence:NP_598552.2Re-query CCDS DB by Nucleotide ID:NM_133791Re-query CCDS DB by Protein ID:NP_598552Link to BLAST:NP_598552.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598552.2 1187 Q6NXJ0 1187 100% 0 0

Chromosomal Locations for CCDS 22301.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 47828718 47828784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47831612 47831739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47842865 47843107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47846147 47846239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47847394 47847558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47849306 47849489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47851905 47852026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47856184 47856348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47858730 47858922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47863853 47863939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47864052 47864132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47864505 47864634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47868172 47868791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47869779 47869868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47875229 47875471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47878828 47878901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47880101 47880247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47883494 47883623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47887072 47887151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47899436 47899512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47900653 47900856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47920589 47920698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47990066 47990196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3564 nt):
ATGCCTAGGAGGGCCGGGAGCGGGCAGCTGCCGCTACCCCGGGGCTGGGAGGAGGCCAGGGACTACGACG
GCAAGGTTTTCTACATCGACCACAACACCAGGAGGACCAGCTGGATCGACCCCCGGGACAGGTTAACGAA
GCCCCTGTCCTTCGCTGACTGTGTCGGGGATGAGCTGCCCTGGGGATGGGAAGCGGGGTTTGACCCTCAG
ATTGGTGCCTACTACATCGACCACATCAACAAAACCACACAGATTGAGGATCCGAGGAAACAGTGGCGGG
GCGAGCAGGAGAAGATGCTCAAGGACTATCTCTCCGTGGCCCAGGACGCACTCAGGACGCAGAAGGAGCT
GTACCACGTGAAGGAACAGAGGCTGGCGCTGGCCCTCGATGAATATGTGCGGTTAAATGATGCCTACAAA
GAAAAATCAAGCTCTCATACCAGCCTCTTCTCAGGGTCTTCATCTAGCACCAAATATGATCCTGATATTT
TAAAAGCTGAGATCTCCACCACACAATTAAGGGTTAAAAAGCTGAAAAGAGAACTCTCCCACATGAAGCA
AGAACTTCTCTATAAGCAGCAAGGCTTTGAAACGCTGCAACAAATTGATGAGAAGATGTCCGGAGGCCAG
AGTGGGTATGAACTTAATGAAGCCAAAGCCATCCTGACAGAACTGAAGTCTATCAGAAAGGCCATCAGTT
CAGGAGAAAAAGAAAAGCAAGACCTGATGCAGAGTCTTGCTAAGCTGCAGGAGCGATTTCATTTGGATCA
AAACATGGGCAGTTCCGAGCCAGATCTGAGATCTAGTCCTGTGAATTCTCATCTCTCTCTGTCCAGACAG
ACCCTTGACGCTGGGTCACAGACAAGCATTTCTGGAGATATTGGGGTTCGAAGCAGATCAAATTTAGCTG
AAAAGGTCAGACTGAGTCTCCAGTATGAAGAAGCCAAAAGAAGCATGGCTAACTTGAAAATTGAACTGTC
AAAGTTGGATGGTGAGGCCTGGCCTGGGGCCCTGGACATCGAGAAGGAGAAGTTGATGCTGATTAATGAG
AAAGAAGAACTTCTGAAGGAGTTGCAGTTTATCACCCCGCAGAAGCGCTCGCAGGAGGAGCTGGAGCGCC
TGGAAGCCGAGCGCCAGCACCTGGAGGAAGAGCTGATGGCCGCCCGGGGCTCACCCAGCAGGGCTCTAAC
CGAGAGATTGAAATTGGAAGAGAAAAGAAAAGAGCTGCTACAGAAACTTGAAGAAACTACTAAGTTAACT
ACTTCCTTGTACTCGCAACTTCAAAGCCTCTCCTCCAGCACACTGTCCATGTCATCTGGGAGCAGTCTAG
GGTCCCTGGCCTCCAGTCGGGGCTCTCTGAACACCTCCAGCAGGGGGTCACTCAACTCCCTCAGTTCCAG
TGAACTCTATTACAGCAGCCAGGGCGACCAGATGGACACAGACTATCAGTATAAACTGGACTTCCTTCTT
CAAGAGAAGGGTGGCTACATTCCTTCCGGACCCATCACCACCATCCACGAAAATGAGGTGGTCAAGTCCC
CCAGCCAGCCCGGCCAGAGTGGGCTCTGTGGGGTGGGAGTGACAGCCAGCAGCCACACAACCCCACTGAC
GGAGGCCTCCAAGTCAGTGGCATCCCTGTCCTCCAGGTCCTCTCTCTCCTCCTTGTCGCCTCCCGGCTCT
CCTCTTGTCCTGGACAGCGTATTTCCAGGGTCCTCCCATGACACCTCTCCACACCAGTTCCCTACCGACT
TTGAGGACTGCGAGCTGAGTCGCCGCTTTGCTGACGTTGGCCTTGGTGAAAACCAGGCCTTGCTGGATTC
AGACTCGGGAGGAGCATCCCAACCTCTCCTTGAGGATAAAGGCCTGAGCGATTGCCCTGGGGAGCTGCTG
TGTGAGGGCGCAACAGATGTGGAAAAGTCGTTACCCAAAAGAAGAGGACTCCATCTTCGAGGAGACAAGA
CCACTCGGGTGTCCGCTGCTGCCTCTGACGAGTCGGTGGCTGGAGACAGTGGGGTCTACGAAGCCTCCAT
GAAGCAGCCTGGTGAAATGGAAGATGTTCCCTACAGTGAAGAGGATGTCACCATTGTGGAGACTGCCCAG
GTGCAGATAGGACTCAGATACGATACAAAGAGTTCAAGTTTCATGGTGATTATAGCACAACTCCGAAATC
TTCATGCCTTCTCGATACCTCATTCTTCAAAAGTGTATTTTAGGGTCGCTCTGCTTCCCTCCTCTGCGGA
TGTCAGCTGTCTGTTTCGAACAAAAGTCCATCCCCCCACCGAATCTGTGCTGTACAACGATGTGTTCAGG
GTGGCCGTTTCCCAGGCAGCCCTTCAACAGAAGACGTTGAGAGTGGATCTCTGCTCCGCCAGTAAACACC
GCAGGGAGGAATGCCTGGCTGGGACGCAGATCAGCCTGGCGGATTTACCATTTTCCAATGAGATCTTCAT
GCTGTGGTATAATTTGCTTCCTTCCAAGCAAATGCCTTGCAAGAAGAATGAAGACGGAAATGAGGAGCCT
GGAGCTCGGTCTCAGCAGCCCATGCTCGACCCTATAGACCTGGACGCCGTGTCAGCCTTACTTGCGAGAA
CTTCAGCTGAGCTCTTGGCTGTGGAACAAGAACTGGCCCAGGAGGAGGAGGAGGAGGAGCTAAGGCCAGA
GCGGCGGGGTCCAGGGAGAGACTGCCTAACGATGCTAAGAGAGGCCTCTGACGAACCTGCGGCTTTGAGA
GAGTCTGGGGTTCCCTTGGCAGAGGGCAGCCGCTGCACAGAGGACCCGAAGCCATGCCCTAGGGGGCCTG
AGACAAGCCAGTGTAGGAAGGAGCCTGCTGAAGACCCTGGTCAGCTGCCATCTGGACTTCCCACCCTGGT
CGATAAGGAGACGAATACAGATGAAGTGGTTGACAGCAATATGGCAGTTCGCCCTAAAGACCGAAGCAGC
CTCAGCTCTCGACAGCATCCATTCGTGAGAAACAGCGTGATAGTGCGCTCACAAACCTTCTCCCCAGGCG
AGCGAAGTCAGTACATCTGCAGGTTAAATCGCAGTGACAGTGACAGCTCAACCTTGGCCAAAAAATCCTT
GTTTGTGCGGAACTCCACTGAGCGGCGCAGTTTGCGGGTCAAAAGGGCGGTTTGCCAGCCCACCCTCAGG
AGGACTGCTCAGGAATGCCCCGTGCGCACTTCTCTGGACCTGGAGCTGGACCTGCAGGCCTCGCTGACCC
GCCAGAGTCGCCTCAATGACGAGCTGCAGGCCCTGAGAGGCTTACGGCAGAAGCTAGAGGAGCTGAAGGC
TCAGGGAGAGACTGACCTTCCCCCAGGCGTGCTGGAGGACGAGAGATTCCAGAAGCTTCTGAAGCAAGCA
GAGAAGCAGGCTGAACAGACGAAAGAGGAGCAGAAGCAAGACTTGAACGCAGAGAGGTTGATGAGGCAGG
TCTCCAAGGATGTGTGCCGACTGCGGGAGCAGAGCCAGAAGGAGCCTCGGCAGGTGCAGTCCTTCAGGGA
GAAGATTGCCTACTTCACAAGAGCGAAGATTAGCATCCCATCACTGCCCGCTGACGACGTGTGA

Translation (1187 aa):
MPRRAGSGQLPLPRGWEEARDYDGKVFYIDHNTRRTSWIDPRDRLTKPLSFADCVGDELPWGWEAGFDPQ
IGAYYIDHINKTTQIEDPRKQWRGEQEKMLKDYLSVAQDALRTQKELYHVKEQRLALALDEYVRLNDAYK
EKSSSHTSLFSGSSSSTKYDPDILKAEISTTQLRVKKLKRELSHMKQELLYKQQGFETLQQIDEKMSGGQ
SGYELNEAKAILTELKSIRKAISSGEKEKQDLMQSLAKLQERFHLDQNMGSSEPDLRSSPVNSHLSLSRQ
TLDAGSQTSISGDIGVRSRSNLAEKVRLSLQYEEAKRSMANLKIELSKLDGEAWPGALDIEKEKLMLINE
KEELLKELQFITPQKRSQEELERLEAERQHLEEELMAARGSPSRALTERLKLEEKRKELLQKLEETTKLT
TSLYSQLQSLSSSTLSMSSGSSLGSLASSRGSLNTSSRGSLNSLSSSELYYSSQGDQMDTDYQYKLDFLL
QEKGGYIPSGPITTIHENEVVKSPSQPGQSGLCGVGVTASSHTTPLTEASKSVASLSSRSSLSSLSPPGS
PLVLDSVFPGSSHDTSPHQFPTDFEDCELSRRFADVGLGENQALLDSDSGGASQPLLEDKGLSDCPGELL
CEGATDVEKSLPKRRGLHLRGDKTTRVSAAASDESVAGDSGVYEASMKQPGEMEDVPYSEEDVTIVETAQ
VQIGLRYDTKSSSFMVIIAQLRNLHAFSIPHSSKVYFRVALLPSSADVSCLFRTKVHPPTESVLYNDVFR
VAVSQAALQQKTLRVDLCSASKHRREECLAGTQISLADLPFSNEIFMLWYNLLPSKQMPCKKNEDGNEEP
GARSQQPMLDPIDLDAVSALLARTSAELLAVEQELAQEEEEEELRPERRGPGRDCLTMLREASDEPAALR
ESGVPLAEGSRCTEDPKPCPRGPETSQCRKEPAEDPGQLPSGLPTLVDKETNTDEVVDSNMAVRPKDRSS
LSSRQHPFVRNSVIVRSQTFSPGERSQYICRLNRSDSDSSTLAKKSLFVRNSTERRSLRVKRAVCQPTLR
RTAQECPVRTSLDLELDLQASLTRQSRLNDELQALRGLRQKLEELKAQGETDLPPGVLEDERFQKLLKQA
EKQAEQTKEEQKQDLNAERLMRQVSKDVCRLREQSQKEPRQVQSFREKIAYFTRAKISIPSLPADDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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