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Report for CCDS21899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21899.1 Public Mus musculus 7 Inpp5f 23 108 98 CCDS HistoryNCBI Gene:101490Re-query CCDS DB by CCDS ID:21899.1Re-query CCDS DB by GeneID:101490See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21899.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043138.12 ENSMUSP00000045910.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043138.12Link to Ensembl Protein Viewer:ENSMUSP00000045910.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000043138Re-query CCDS DB by Protein ID:ENSMUSP00000045910
Original member Current member NCBI NM_178641.5 NP_848756.2 Accepted alive Link to Nucleotide Sequence:NM_178641.5Link to Protein Sequence:NP_848756.2Re-query CCDS DB by Nucleotide ID:NM_178641Re-query CCDS DB by Protein ID:NP_848756Link to BLAST:NP_848756.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848756.2 1132 Q8CDA1-1 1132 100% 0 0

Chromosomal Locations for CCDS 21899.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128611595 128611691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128636158 128636238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128659016 128659152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128663638 128663766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128663977 128664144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128664249 128664305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128667597 128667795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128668414 128668593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128669931 128669998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128675298 128675422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128676729 128676806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128677997 128678117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128679717 128679845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128682248 128682365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128685086 128685284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128690627 128690698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128691752 128691825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128692254 128692382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128693645 128693732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128694176 128695325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3399 nt):
ATGGAGCTCTTTCAGGCTAAGGACCACTACATCCTGCAGCAGGGCGAGCGTGCCCTGTGGTGCAGCCGGC
GCGACGGCGGCCTGCAGCTCCGACCGGCCACGGATCTGCTTCTTGCCTGGAACCCCATTTGTTTGGGATT
AGTGGAAGGTGTAATTGGGAAAATTCAACTTCATTCAGATCTTCCATGGTGGCTTATTTTAATTCGGCAG
AAAGCGTTGGTAGGCAAACTCCCAGGAGACCATGAGGTCTGTAAAGTCACCAAGATTGCTGTATTGTCAC
TTTCTGAAATGGAACCTCAGGAGCTTGAGCTGGAGCTCTGTAAGAAGCATCATTTTGGAATTAACAAGCC
TGAGAAGATTATACCATCTCCTGACGACTCCAAGTTTCTACTGAAGACATTTACAAATATCAAATCCAAC
GTGTCTGCTCCCAACAAAAAGAAAGTTAAAGAAAGTAAAGAAAAGGAGAAACTGGAGCGGCGTTTGCTTG
AGGAGTTGCTGAAGATGTTCATGGACTCAGAGTCCTTCTATTATAGCTTGACCTATGACCTGACCAACTC
GGTGCAGAGACAGAGCACTGGGGAGAGGGATGGCCGTCCCCTGTGGCAGAAGGTTGATGACCGATTTTTC
TGGAATAAGTACATGATCCAAGCTCTCACTGAGATTGGTACTCCGGATGTGGACTTCTGGATCATCCCCA
TTATCCAGGGTTTTGTGCAGATTGAAGAACTTGTGGTTAATTACAATGAGTCCTCGGATGATGACAAGAG
CAGCCCAGAGACGCCCCCTCAGGACTCCACTTGTGTAGATGACATTCACCCACGATTTCTAGTGGCTCTT
ATATCTCGAAGAAGTAGGCACAGAGCAGGAATGCGGTATAAACGAAGAGGAGTGGATAAAAATGGAAATG
TTGCGAATTATGTGGAGACTGAGCAGTTAATCCATGTTCATCATCATACCCTGTCATTTATCCAAACTCG
AGGCTCTGTGCCGGTCTTTTGGAGCCAGGTTGGGTATCGCTATAATCCAAGACCTCGGCTAGACAAAAGT
GAGAAGGAAACGGTTGACTGTTTCTGTGCCCATTTTGAAGAACAACTGAAAATTTACAAAAAACAGGTTA
TTGTTAACTTGGTAGACCAGGCTGGAAGGGAGAAGATTATTGGTGATGCTTACCTGAAGCAGGTGCTGCT
CTTCAACAACCCCAAGCTCACCTATGTCTCCTTCGATTTCCATGAGCACTGCCGAGGAATGAAGTTCGAG
AATGTTCAAACCCTCACGGATGCCATTCATGACATCATCATTGACATGAAGTGGTGTTGGGTTGATCAAG
CTGGTGTGATATGTAAGCAAGAAGGGATTTTTCGAGTTAATTGCATGGACTGCCTGGATCGCACCAACGT
GGTCCAGGCTGCCATAGCGCGCGTGGTCATGGAACAGCAGCTTAAAAAACTAGGTGTGATGCCCCCAGAG
CAGCCACTACCTGTGAAATGTAATCGGACCTACCAGATAATGTGGGCCAACAACGGTGACTCCATCAGCA
GGCAGTATGCTGGGACTGCTGCTCTAAAGGGTGACTTTACAAGAACAGGAGAAAGGAAGTTGGCAGGAGT
TATGAAAGATGGCGTTAACTCGGCAAATAGGTACTACCTCAGTCGGTTCAAGGATGCCTACAGGCAAGCC
GTCATAGATCTGATGCAAGGCGTCCCAGTGACAGAAGACCTTTACTCCATATTTACCAAGGAGAAGGAGC
ATGAAGCTTTGCATAAGGAGAGCCAGAGAAGCCACCAGGAGCTCATCAGCCAGCTCTTACAGAGTTATAT
GCAGTTGCTGCTGCCGGGTGACGAGAAGTTCCACGGGGGCTGGGCCCTGGTTGACTGCGACCCCAGCCTC
ACTGACGCTGCGCACAGAGATGTGGAAGTGCTGCTGCTGCTGTCTAACGCTGCCTACTATGTGGCCTATT
ATGATGACGAAGTTGATAAAGTAAACCAGTATCAACGACTGGGCCTAGAAGACCTGGAAAGAATAGAAAT
AGGTCCTGAACCTACTCTTTTCGGCAAACCCAAGTTCTCGTGCATGCGGCTGCACTACAGGTGTAAAGAA
GCAGGCGGTTACTTCCATACGCTAAGAGCTGTGCCACGTAGTCCTGAAGAAGATGGCAAAGACACTCTTC
AGTGCATCGCAGAGATGCTGCAGATCACCAAGCAAGCCATGGGACTGGACGTTCCTATCATTGAGAAGAA
ACTTGAGAGGAAAAGCAGTAAGCCTCATGAAGACATCATTGGTATCAGATCTCAAAACCAAGGCTCTCTT
GCCCAGGGGAAAAGCTTTTTAATGAGCAAATTTTCATCTCTAAATCAAAAAGTAAAGCAGACCAAATCCA
ATGTGAACATCGGCAACCTACGAAAATTAGGAAACTTTACAAAGCCTGAAATGAAAGTTAACTTTCTAAA
ACCAAACTTAAAAGTCAATCTTTGGAAGTCAGATAGTAGTCTTGAGACCATGGAAAACCCAGGAGTGATG
GGTAATAAGGTCCAGGGGGAGTCTGATGGGGACATTTCTTCAGATAACGACTCGTACCACTCTGATGAAT
TCCTTACAAATTCTAAGTCGGAGGAAGACAAGCAGCTAGCCAATTCTTTAGAGAGCGTAGGGCCAATAGA
TTACATTCTCCCAAGCTGTGGGATTATTGTGTCAGCACCTCGATTAGGCAGTCGGTCTCAGTCTGCCAGC
AGTATCGACGTCAGCACTCATGCCCCCTCAGAAGCTGCTGCTGGTCCTGGAAGTGAACTTGGGAAAGGCC
TGGAGTCTCCCCTGAAGAAAAGCCCTTCTGCTGACAGCATACACACACGGACTGGCTTCACAAAGCCCAT
GGATGTTTACTGCCAGAGATTTGTGCAGGATGCACAGAACAAAATGAATGACCTGTCAGAGATCAGGTCT
GTAGCTCAGAAGAGTGAGGAGGGAAGTCACAAGACTAACCGTGTGTCTAATGAAGAAACCCAGTCAGAAC
CAATGGGACAGACGCCTCCTCGACCCTCTCAGTTAAACGTCTCTTGTTCTGTGGCAGGCCCACCATTCTT
ATCAGTTGAACCAGTACATTCAGTGCTATCTCAGAAGACGCCCAGCTCCGGGTCCAGCCTTCTGGAACTT
GAGGCAGGGCTCTGCGTAACTCCCTCTTCAGAGAGCAGCAGCAGCAGGGCAGTCTCTCCCTTTGCAAAGA
TCCGCAGCTCCATGGTCCAAGTCGCTAATATTACCCAAGCTGGGCTAACTCATGGGATAAACTTGGCGGT
TGCCAAAGTTCAGAAGAGTCCAGCAGAACCCGAAGCGGTTAACGAAATTCAACAAAATGAACTTAAAAAT
ATGTTTACACAATGCCAGACACGAATAATTCAGATTTAG

Translation (1132 aa):
MELFQAKDHYILQQGERALWCSRRDGGLQLRPATDLLLAWNPICLGLVEGVIGKIQLHSDLPWWLILIRQ
KALVGKLPGDHEVCKVTKIAVLSLSEMEPQELELELCKKHHFGINKPEKIIPSPDDSKFLLKTFTNIKSN
VSAPNKKKVKESKEKEKLERRLLEELLKMFMDSESFYYSLTYDLTNSVQRQSTGERDGRPLWQKVDDRFF
WNKYMIQALTEIGTPDVDFWIIPIIQGFVQIEELVVNYNESSDDDKSSPETPPQDSTCVDDIHPRFLVAL
ISRRSRHRAGMRYKRRGVDKNGNVANYVETEQLIHVHHHTLSFIQTRGSVPVFWSQVGYRYNPRPRLDKS
EKETVDCFCAHFEEQLKIYKKQVIVNLVDQAGREKIIGDAYLKQVLLFNNPKLTYVSFDFHEHCRGMKFE
NVQTLTDAIHDIIIDMKWCWVDQAGVICKQEGIFRVNCMDCLDRTNVVQAAIARVVMEQQLKKLGVMPPE
QPLPVKCNRTYQIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYYLSRFKDAYRQA
VIDLMQGVPVTEDLYSIFTKEKEHEALHKESQRSHQELISQLLQSYMQLLLPGDEKFHGGWALVDCDPSL
TDAAHRDVEVLLLLSNAAYYVAYYDDEVDKVNQYQRLGLEDLERIEIGPEPTLFGKPKFSCMRLHYRCKE
AGGYFHTLRAVPRSPEEDGKDTLQCIAEMLQITKQAMGLDVPIIEKKLERKSSKPHEDIIGIRSQNQGSL
AQGKSFLMSKFSSLNQKVKQTKSNVNIGNLRKLGNFTKPEMKVNFLKPNLKVNLWKSDSSLETMENPGVM
GNKVQGESDGDISSDNDSYHSDEFLTNSKSEEDKQLANSLESVGPIDYILPSCGIIVSAPRLGSRSQSAS
SIDVSTHAPSEAAAGPGSELGKGLESPLKKSPSADSIHTRTGFTKPMDVYCQRFVQDAQNKMNDLSEIRS
VAQKSEEGSHKTNRVSNEETQSEPMGQTPPRPSQLNVSCSVAGPPFLSVEPVHSVLSQKTPSSGSSLLEL
EAGLCVTPSSESSSSRAVSPFAKIRSSMVQVANITQAGLTHGINLAVAKVQKSPAEPEAVNEIQQNELKN
MFTQCQTRIIQI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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