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Report for CCDS21898.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21898.1 Public Mus musculus 7 Bag3 23 108 98 CCDS HistoryNCBI Gene:29810Re-query CCDS DB by CCDS ID:21898.1Re-query CCDS DB by GeneID:29810See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21898.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033136.8 ENSMUSP00000033136.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033136.8Link to Ensembl Protein Viewer:ENSMUSP00000033136.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033136Re-query CCDS DB by Protein ID:ENSMUSP00000033136
Original member Current member NCBI NM_013863.5 NP_038891.4 Accepted alive Link to Nucleotide Sequence:NM_013863.5Link to Protein Sequence:NP_038891.4Re-query CCDS DB by Nucleotide ID:NM_013863Re-query CCDS DB by Protein ID:NP_038891Link to BLAST:NP_038891.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038891.4 577 Q9JLV1 577 100% 0 0

Chromosomal Locations for CCDS 21898.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128523859 128524044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128539973 128540311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128541807 128542208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128545590 128546396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGAGCGCCGCCACCCAATCGCCCATGATGCAGATGGCGTCCGGCAACGGAGCCAGCGACCGAGACCCCC
TGCCCCCGGGCTGGGAGATCAAAATCGACCCGCAGACCGGCTGGCCCTTCTTCGTGGACCACAACAGCCG
CACCACGACGTGGAACGACCCGCGTGTGCCCCCCGAGGGCCCTAAGGACACTGCATCTTCAGCCAATGGC
CCTTCCCGCGATGGCTCCCGCCTGCTGCCCATTAGGGAAGGCCACCCCATATACCCCCAGCTCCGACCAG
GCTACATTCCCATCCCCGTCCTCCATGAAGGCTCCGAGAACCGGCAGCCCCACCTTTTCCATGCCTACTC
CCAGCCTGGGGTGCAGCGATTTCGTACCGAGGCTGCAGCGGCCACTCCGCAGAGGTCCCAGTCTCCTTTA
CGTGGCGGCATGACAGAAGCCGCCCAGACAGATAAACAGTGTGGACAGATGCCGGCAACTGCAACAACTG
CAGCAGCTCAGCCCCCAACTGCTCATGGACCTGAGCGATCTCAGTCTCCAGCTGCCTCTGACTGCTCATC
CTCTTCCTCCTCGGCCAGCCTGCCCTCCTCCGGCAGGAGCAGTCTGGGTAGCCATCAGCTCCCCAGGGGC
TACATCCCCATCCCCGTGATACATGAGCAGAATATCACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAG
CCCAGAAGACCCACTACCCAGCTCAGCAGGGTGAATACCAGCCCCAGCAGCCTGTATACCACAAGATCCA
GGGCGATGACTGGGAGCCCCGGCCGCTTCGAGCCGCTTCTCCATTCAGGTCACCCGTCAGAGGTGCTTCC
AGCCGGGAAGGCTCGCCCGCCAGAAGCGGCACACCGGTTCACTGCCCATCTCCCATCCGTGTGCACACAG
TGGTTGACAGGCCTCAGCCCATGACCCATCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGA
AAGTAAGCCAGGCCCAGCCGGACCAGACCTCCCTCCTGGACACATCCCCATCCAAGTGATCCGAAGGGAG
GCAGACTCTAAGCCTGTTTCCCAGAAGTCACCTCCTCCTGCTGAAAAGGTAGAAGTAAAGGTCTCCTCTG
CTCCAATTCCTTGTCCTTCTCCCAGCCCCGCTCCTTCGGCTGTCCCTTCTCCCCCCAAGAATGTGGCTGC
AGAACAGAAGGCGGCCCCCAGCCCTGCCCCTGCAGAACCTGCAGCCCCCAAATCGGGAGAAGCCGAAACA
CCCCCTAAGCATCCAGGTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTACAAGGGCTGGAGCAGGCTG
TAGACAGCTTTGAAGGCAAGAAGACTGATAAAAAATACCTGATGATCGAAGAGTATTTGACCAAAGAGCT
GCTGGCCCTGGATTCCGTAGACCCTGAAGGACGAGCTGATGTGCGGCAGGCCAGGAGAGATGGCGTCAGG
AAGGTTCAGACCATCTTGGAAAAACTTGAGCAGAAAGCAATTGATGTCCCAGGTCAAGTACAAGTCTATG
AACTCCAGCCCAGCAACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAA
GGATAAGAAAGGTCCTGAAAACAAAGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAAAGCAGCCACA
CCTCCAAATCCCAGCAACCCAGCAGACTCAGCTGGCAACCTGGTGGCTCCCTAG

Translation (577 aa):
MSAATQSPMMQMASGNGASDRDPLPPGWEIKIDPQTGWPFFVDHNSRTTTWNDPRVPPEGPKDTASSANG
PSRDGSRLLPIREGHPIYPQLRPGYIPIPVLHEGSENRQPHLFHAYSQPGVQRFRTEAAAATPQRSQSPL
RGGMTEAAQTDKQCGQMPATATTAAAQPPTAHGPERSQSPAASDCSSSSSSASLPSSGRSSLGSHQLPRG
YIPIPVIHEQNITRPAAQPSFHQAQKTHYPAQQGEYQPQQPVYHKIQGDDWEPRPLRAASPFRSPVRGAS
SREGSPARSGTPVHCPSPIRVHTVVDRPQPMTHREPPPVTQPENKPESKPGPAGPDLPPGHIPIQVIRRE
ADSKPVSQKSPPPAEKVEVKVSSAPIPCPSPSPAPSAVPSPPKNVAAEQKAAPSPAPAEPAAPKSGEAET
PPKHPGVLKVEAILEKVQGLEQAVDSFEGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDGVR
KVQTILEKLEQKAIDVPGQVQVYELQPSNLEAEQPLQEIMGAVVADKDKKGPENKDPQTESQQLEAKAAT
PPNPSNPADSAGNLVAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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