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Report for CCDS21768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21768.1 Public Mus musculus 7 Rps15a 23 108 98 CCDS HistoryNCBI Gene:267019Re-query CCDS DB by CCDS ID:21768.1Re-query CCDS DB by GeneID:267019See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21768.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106588.7 ENSMUSP00000102198.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106588.7Link to Ensembl Protein Viewer:ENSMUSP00000102198.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106588Re-query CCDS DB by Protein ID:ENSMUSP00000102198
Original member Current member EBI ENSMUST00000131374.7 ENSMUSP00000119975.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000131374.7Link to Ensembl Protein Viewer:ENSMUSP00000119975.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000131374Re-query CCDS DB by Protein ID:ENSMUSP00000119975
Original member Current member EBI ENSMUST00000172457.7 ENSMUSP00000127791.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172457.7Link to Ensembl Protein Viewer:ENSMUSP00000127791.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172457Re-query CCDS DB by Protein ID:ENSMUSP00000127791
Original member Current member NCBI NM_170669.2 NP_733769.1 Accepted alive Link to Nucleotide Sequence:NM_170669.2Link to Protein Sequence:NP_733769.1Re-query CCDS DB by Nucleotide ID:NM_170669Re-query CCDS DB by Protein ID:NP_733769Link to BLAST:NP_733769.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733769.1 130 P62245 130 100% 0 0

Chromosomal Locations for CCDS 21768.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 118109100 118109193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118109933 118110018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118114785 118114864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 118115109 118115241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGGTGCGAATGAATGTTCTGGCGGATGCTCTCAAGAGCATCAACAACGCTGAGAAGAGAGGCAAACGCC
AGGTCCTCATCAGGCCATGTTCTAAAGTCATCGTTCGGTTCTTAACCGTGATGATGAAGCACGGATACAT
TGGTGAATTTGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGGAAGGTTGAAC
AAGTGTGGCGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTAGAGAAATGGCAGAACAACCTGC
TCCCTTCACGTCAGTTTGGCTTCATTGTGCTGACAACCTCGGCTGGCATTATGGACCATGAAGAGGCAAG
ACGAAAACATACAGGAGGGAAAATCCTGGGATTCTTTTTTTAA

Translation (130 aa):
MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLN
KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF


Links Key
 Links to:   History report
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