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Report for CCDS21452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21452.1 Public Mus musculus 7 Prcp 23 108 98 CCDS HistoryNCBI Gene:72461Re-query CCDS DB by CCDS ID:21452.1Re-query CCDS DB by GeneID:72461See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21452.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076052.7 ENSMUSP00000075429.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076052.7Link to Ensembl Protein Viewer:ENSMUSP00000075429.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000076052Re-query CCDS DB by Protein ID:ENSMUSP00000075429
Original member Current member NCBI NM_028243.3 NP_082519.1 Accepted alive Link to Nucleotide Sequence:NM_028243.3Link to Protein Sequence:NP_082519.1Re-query CCDS DB by Nucleotide ID:NM_028243Re-query CCDS DB by Protein ID:NP_082519Link to BLAST:NP_082519.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082519.1 491 Q7TMR0-1 491 100% 0 0

Chromosomal Locations for CCDS 21452.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 92875339 92875500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92901159 92901299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92905111 92905212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92910135 92910316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92917669 92917826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92919002 92919171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92927680 92927844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92928605 92928792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 92932972 92933179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGGCTGCCGGGCTCTCCTGCTCCTGTCTTTCCTATTACTCGGGGCCGCCACAACCATCCCGCCTAGGC
TAAAGACCCTCGGCAGCCCGCATTTGTCAGCCAGTCCCACACCCGACCCTGCTGTAGCCCGTAAATACTC
AGTTCTTTACTTCGAACAGAAGGTTGACCACTTTGGGTTTGCTGACATGAGAACTTTTAAACAGCGGTAC
CTAGTCGCTGATAAACACTGGCAGAGAAATGGTGGATCAATACTTTTCTACACTGGTAACGAAGGGGACA
TTGTCTGGTTTTGCAATAATACGGGGTTCATGTGGGATGTGGCTGAGGAGCTGAAAGCTATGCTGGTGTT
CGCTGAGCATCGATACTATGGGGAGTCCCTTCCCTTTGGTCAGGACTCCTTCAAGGATTCCCAACACTTG
AATTTCCTGACATCAGAACAGGCTCTGGCTGATTTTGCAGAGTTAATCAGACACTTGGAAAAAACAATCC
CAGGAGCTCAAGGTCAACCTGTCATCGCCATCGGGGGCTCTTATGGTGGCATGCTTGCAGCCTGGTTCAG
GATGAAGTATCCTCACATTGTAGTTGGAGCTCTTGCAGCTTCTGCCCCTATCTGGCAGCTTGATGGTATG
GTTCCCTGTGGTGAGTTTATGAAGATTGTAACTAACGATTTCAGGAAAAGTGGTCCTTATTGTTCAGAAA
GTATCCGCAAATCCTGGAATGTCATTGACAAACTCTCAGGTTCAGGCAGTGGTCTCCAGTCGCTCACGAA
CATTCTTCACCTATGTAGTCCCTTGACTTCTGAGAAAATCCCAACTTTAAAAGGATGGATAGCTGAGACC
TGGGTGAACCTGGCCATGGTGAACTACCCTTACGCATGCAACTTTTTGCAGCCTTTGCCTGCTTGGCCCA
TCAAGGAGGTGTGCCAATATTTGAAAAATCCTAATGTATCGGATACAGTGCTGCTGCAGAATATTTTCCA
AGCTCTGAGTGTATATTATAACTATTCAGGCCAAGCAGCATGCCTGAATATTTCACAAACGACTACGAGC
AGTCTGGGCTCCATGGGCTGGAGCTTTCAGGCCTGCACAGAAATGGTCATGCCCTTTTGTACTAATGGTA
TTGATGACATGTTTGAACCCTTTCTGTGGGACTTGGAGAAGTATTCCAATGACTGTTTTAACCAGTGGGG
AGTGAAACCACGGCCTCATTGGATGACTACCATGTACGGTGGCAAAAACATCAGTTCACACTCAAACATC
ATTTTCAGCAATGGTGAGTTAGACCCGTGGTCAGGAGGTGGAGTAACCAGAGACATCACAGACACCCTGG
TGGCTATCAACATCCATGACGGGGCCCATCATTTAGATCTCCGAGCCCACAACGCCTTCGATCCTTCCTC
TGTGCTGTTATCTCGATTATTGGAAGTTAAACACATGAAGAAATGGATTTTAGATTTCTATAGCAATATC
CAATGA

Translation (491 aa):
MGCRALLLLSFLLLGAATTIPPRLKTLGSPHLSASPTPDPAVARKYSVLYFEQKVDHFGFADMRTFKQRY
LVADKHWQRNGGSILFYTGNEGDIVWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGQDSFKDSQHL
NFLTSEQALADFAELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGM
VPCGEFMKIVTNDFRKSGPYCSESIRKSWNVIDKLSGSGSGLQSLTNILHLCSPLTSEKIPTLKGWIAET
WVNLAMVNYPYACNFLQPLPAWPIKEVCQYLKNPNVSDTVLLQNIFQALSVYYNYSGQAACLNISQTTTS
SLGSMGWSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDCFNQWGVKPRPHWMTTMYGGKNISSHSNI
IFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLDLRAHNAFDPSSVLLSRLLEVKHMKKWILDFYSNI
Q


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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