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Report for CCDS21339.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21339.1 Public Mus musculus 7 Tars3 23 108 98 CCDS HistoryNCBI Gene:272396Re-query CCDS DB by CCDS ID:21339.1Re-query CCDS DB by GeneID:272396See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21339.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032728.8 ENSMUSP00000032728.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032728.8Link to Ensembl Protein Viewer:ENSMUSP00000032728.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032728Re-query CCDS DB by Protein ID:ENSMUSP00000032728
Original member Current member NCBI NM_172310.2 NP_758514.2 Accepted alive Link to Nucleotide Sequence:NM_172310.2Link to Protein Sequence:NP_758514.2Re-query CCDS DB by Nucleotide ID:NM_172310Re-query CCDS DB by Protein ID:NP_758514Link to BLAST:NP_758514.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758514.2 790 Q8BLY2 790 100% 0 0

Chromosomal Locations for CCDS 21339.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 65644945 65645214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65646253 65646321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65647478 65647668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65652260 65652383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65655684 65655805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65658860 65658977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65661119 65661183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65662301 65662379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65663873 65664019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65664881 65664979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65675964 65676130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65677996 65678158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65682767 65682904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65683808 65683885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65684062 65684162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65686438 65686542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65688879 65688951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65689968 65690082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65691171 65691319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2373 nt):
ATGGCGGCCCAGGCCCTGGCGGCTCAGGCGGTGGCCTCGCGCCTGCAGCGGCAGGAGGAGGACATCCGCT
GGCTGTGCGCGGAGGTGCAGCGCCTGAGGGACGAGCAGCTGCGCGGGCCCGAGCGGGGCCAAGCCGAGGG
CCCGCGCCTGACACGCGAGGTGGCACAGCTCCAGGCGGAGAACCGCGACCTGCACCAGCGCCTGTGTGGC
CTGCGGCTGCGCCTGGCGGAGCAGCGCCGCACCGAGGCCGGGCGAGCGGCGGCGCACGAGCCTCCTACCC
AAAACCAAGAGAAGGACACAAAGAAGAAGAGGCTGAAGCAGAGTGAGCCTGGCCGGGAGGTGAAGCAACC
GAATTTTATAAAAGAGAGATTGCAGCTTTTTGAAACATTGAAGACAGATCATCAACTGTTACCTGCTACT
CAGGAAAAGAAGAACACAAACAACGTGATTTCAGTGAGGGTGGCTGGTGGGAAGACAGTGCAAGGAGAAA
GGTGGAAAACAACACCTTATCAAGTGGCCGCTGGAATTAGTAAGGAATTGGCTGAACATACAGTGATTGC
CAAAGTGAACGGTGTATTGTGGGATCTGGACCGCCCGTTGGAAGGGGACTCCACTGTGGAGCTGCTGATG
TTTGACAACGAGGAAGCCCAGGCTGTGTACTGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAAC
TTTACTATGGAGGCCACCTGTGTTATGGCCCACCCATTGAAAATGGGTTTTATTATGATATGTTTATTGA
AGACAGAGTGGTGTCCAGCACTGAGTTGTCTGCCCTGGAGAACATATGTAAAACTATCATCAAAGAAAAG
CAACCGTTTGAAAGACTGGAAGTCAGCAAGGACACTCTCCTGGAAATGTTTAAGTACAATAAATTTAAGT
GCCGGATTCTGAAGGAGAAAGTGGACACTCCGACGACCACTGTTTACAGGTGTGGTCCATTGATTGACCT
TTGTAAAGGCCCCCATGTAAGACACACTGGAAAAATTAAAGCCATAAAAATTTTCAAGAACTCCTCAACA
TATTGGGAAGGCAACCCTGAGATGGAAACTTTGCAGCGGATCTATGGGATATCCTTTCCTGACAGCAAAA
TGATGAAAGACTGGGAAAAATTCCAAGAGGAAGCCAAGAGCCGGGACCACAGGAAAATCGGGAAGGAACA
AGAACTTTTCTTCTTCCATGATCTGAGCCCTGGAAGCTGTTTTTTCCTCCCGAGAGGAGCGTTCATTTAC
AATGCGCTTATGGATTTCATACGAGAGGAATATCACAAGCGTAACTTCACAGAAGTGCTCTCTCCCAACA
TGTACAACAGTAAACTCTGGGAAACATCAGGCCACTGGCAGCATTACAGTAACAACATGTTCACCTTTGA
CGTCGAGAAGGACACTTTCGCCCTCAAACCCATGAACTGTCCAGGGCACTGTTTAATGTTCGCACATCGC
CCGCGATCCTGGAGGGAAATGCCTGTTAGATTTGCTGATTTTGGAGTTCTTCACAGAAATGAGCTGTCAG
GCACTTTAAGCGGCTTAACCCGAGTGAGGCGCTTCCAGCAAGATGATGCGCACATCTTCTGCATGGTGGA
GCAGATCGAAGAAGAAATAAAGGGGTGCTTGCACTTTTTACAGTCCGTTTACTCGACGTTTGGCTTCTCC
TTTCAATTAAACCTGTCCACAAGGCCTGAGCACTTCCTAGGAGAGATTGAGATATGGGATGAAGCTGAAA
GGCAACTGCAGAACAGCTTGGTGGAATTTGGAAAACCATGGAAAATAAACCCAGGAGATGGAGCATTCTA
TGGCCCTAAAATCGATATAAAAATTAAAGATGCTATTGGCAGATACCATCAGTGTGCTACAATTCAGCTG
GACTTCCAACTGCCTATCAGGTTTAACCTCACATATGTGAGTAAGGATGGGGATGACAAGAACAGGCCTG
TGATCATTCACCGCGCCATCCTGGGGTCTGTGGAAAGGATGATAGCCATCCTCTCAGAGAACTACGGGGG
GAAATGGCCTCTCTGGCTGTCCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAGCTTGTGAAAATTAT
GCACTACAGGTGTCCAAGGAATGCTTCGAAGAAGGCTTCATGGCCGATGTGGACTTAGATGACAGTTGTA
CACTAAATAAGAAAATACGGAATGCACAGCTGGCTCAGTATAATTTCATTTTGGTGGTTGGCGAAAAGGA
AAAGATCAACAATGCAGTAAATGTTCGAACAAGAGACAACAAAATTCATGGAGAAATATCAATAGCTTCC
GTCATTGAAAAATTGAAGAACCTCAAAAAATCACGTACGCTAAATGCCGAGGAAGACTTCTGA

Translation (790 aa):
MAAQALAAQAVASRLQRQEEDIRWLCAEVQRLRDEQLRGPERGQAEGPRLTREVAQLQAENRDLHQRLCG
LRLRLAEQRRTEAGRAAAHEPPTQNQEKDTKKKRLKQSEPGREVKQPNFIKERLQLFETLKTDHQLLPAT
QEKKNTNNVISVRVAGGKTVQGERWKTTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELLM
FDNEEAQAVYWHSSAHILGEAMELYYGGHLCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEK
QPFERLEVSKDTLLEMFKYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSST
YWEGNPEMETLQRIYGISFPDSKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIY
NALMDFIREEYHKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVEKDTFALKPMNCPGHCLMFAHR
PRSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFS
FQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQL
DFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENY
ALQVSKECFEEGFMADVDLDDSCTLNKKIRNAQLAQYNFILVVGEKEKINNAVNVRTRDNKIHGEISIAS
VIEKLKNLKKSRTLNAEEDF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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