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Report for CCDS2131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2131.1 Public Homo sapiens 2 RALB 24 110 108 CCDS HistoryNCBI Gene:5899Re-query CCDS DB by CCDS ID:2131.1Re-query CCDS DB by GeneID:5899See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272519.10 ENSP00000272519.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272519.10Link to Ensembl Protein Viewer:ENSP00000272519.4Re-query CCDS DB by Nucleotide ID:ENST00000272519Re-query CCDS DB by Protein ID:ENSP00000272519
Original member Current member EBI ENST00000420510.5 ENSP00000414224.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420510.5Link to Ensembl Protein Viewer:ENSP00000414224.1Re-query CCDS DB by Nucleotide ID:ENST00000420510Re-query CCDS DB by Protein ID:ENSP00000414224
Original member Current member NCBI NM_001369400.1 NP_001356329.1 Accepted alive Link to Nucleotide Sequence:NM_001369400.1Link to Protein Sequence:NP_001356329.1Re-query CCDS DB by Nucleotide ID:NM_001369400Re-query CCDS DB by Protein ID:NP_001356329Link to BLAST:NP_001356329.1
Original member Current member NCBI NM_002881.3 NP_002872.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002881.3Link to Protein Sequence:NP_002872.1Re-query CCDS DB by Nucleotide ID:NM_002881Re-query CCDS DB by Protein ID:NP_002872Link to BLAST:NP_002872.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356329.1 206 P11234-1 206 100% 0 0
NP_002872.1 206 P11234-1 206 100% 0 0

Chromosomal Locations for CCDS 2131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 120278665 120278778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120285874 120286082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120289580 120289757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 120293141 120293260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGCTGCCAACAAGAGTAAGGGCCAGAGCTCCTTGGCCCTCCACAAGGTGATCATGGTTGGCAGCGGAG
GCGTTGGCAAGTCAGCCCTGACGCTTCAGTTCATGTATGACGAGTTTGTAGAAGACTATGAACCTACCAA
AGCTGACAGTTATAGAAAGAAAGTGGTTCTTGATGGGGAAGAAGTTCAGATAGATATTCTGGACACCGCT
GGGCAAGAGGACTACGCAGCCATTCGAGATAACTACTTTCGGAGTGGGGAAGGGTTTCTTCTTGTGTTCT
CAATCACAGAACATGAATCCTTTACAGCAACTGCCGAATTCAGGGAACAGATTCTCCGTGTGAAGGCTGA
AGAAGATAAAATTCCACTGCTCGTCGTGGGAAACAAGTCTGACCTAGAGGAGCGGAGGCAGGTGCCTGTG
GAGGAGGCCAGGAGTAAAGCCGAAGAGTGGGGCGTGCAGTACGTGGAGACGTCAGCGAAGACCCGGGCCA
ACGTGGACAAGGTGTTCTTTGACCTAATGAGAGAAATCAGAACAAAGAAGATGTCAGAAAACAAAGACAA
GAATGGCAAGAAAAGCAGCAAGAACAAGAAAAGTTTTAAAGAAAGATGTTGCTTACTATGA

Translation (206 aa):
MAANKSKGQSSLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTA
GQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPV
EEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKSSKNKKSFKERCCLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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