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Report for CCDS20952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20952.1 Public Mus musculus 7 Zfp428 23 108 98 CCDS HistoryNCBI Gene:232969Re-query CCDS DB by CCDS ID:20952.1Re-query CCDS DB by GeneID:232969See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20952.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071361.12 ENSMUSP00000071318.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071361.12Link to Ensembl Protein Viewer:ENSMUSP00000071318.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000071361Re-query CCDS DB by Protein ID:ENSMUSP00000071318
Original member Current member NCBI NM_146183.2 NP_666295.2 Accepted alive Link to Nucleotide Sequence:NM_146183.2Link to Protein Sequence:NP_666295.2Re-query CCDS DB by Nucleotide ID:NM_146183Re-query CCDS DB by Protein ID:NP_666295Link to BLAST:NP_666295.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666295.2 176 Q8C1M2 176 100% 0 0

Chromosomal Locations for CCDS 20952.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24510678 24510753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24515076 24515530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGACAGAGACCCGTGAACCCACTGAGACTGGAGGCTACGCCAGCTTGGAGGAAGATGATGAAGACCTTT
CCCCAGAGCCCGACTCTGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGACCACTGATGACCCCGAATATGA
CCCTGGCTATAAGGTGAAACAGCGAATAGGTGGGGGCAGGGGTGGCCCGTCCCGCCGAGCCCCCCGAGCA
ACCCAGCCTGCTGGCCCACCTGCACAGCCTTGCCAGCTCTGCGGCCGATCAGCGCTGGGAGAGGCCCCGC
CGGGTACCCCACCTTGCCGACTCTGCTGCCCTGCAACAGCAACCCAAGAAGCCCCAGGCCCTGAGAGCAG
GGCTCTTGGAGAGGAAGAGGAGGAACCGTCTCGCACTGGGGAAACTCGGCCAGCAGGGCGGGATGGGGAC
GAAGACGAGGAGGAGGGGGGCACCTACCACTGTACGGAGTGTGAGGACTCCTTTGACAACCTCGGGGAGC
TGCATGGCCACTTCATGCTGCATGCCCGGGGCGAGGTGTAG

Translation (176 aa):
MTETREPTETGGYASLEEDDEDLSPEPDSEEEEEEEEEETTDDPEYDPGYKVKQRIGGGRGGPSRRAPRA
TQPAGPPAQPCQLCGRSALGEAPPGTPPCRLCCPATATQEAPGPESRALGEEEEEPSRTGETRPAGRDGD
EDEEEGGTYHCTECEDSFDNLGELHGHFMLHARGEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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