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Report for CCDS20545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20545.1 Public Mus musculus 6 Mrpl51 23 108 98 CCDS HistoryNCBI Gene:66493Re-query CCDS DB by CCDS ID:20545.1Re-query CCDS DB by GeneID:66493See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20545.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032485.6 ENSMUSP00000032485.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032485.6Link to Ensembl Protein Viewer:ENSMUSP00000032485.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000032485Re-query CCDS DB by Protein ID:ENSMUSP00000032485
Original member Current member NCBI NM_025595.3 NP_079871.1 Accepted alive Link to Nucleotide Sequence:NM_025595.3Link to Protein Sequence:NP_079871.1Re-query CCDS DB by Nucleotide ID:NM_025595Re-query CCDS DB by Protein ID:NP_079871Link to BLAST:NP_079871.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079871.1 128 Q9CPY1 128 100% 0 0

Chromosomal Locations for CCDS 20545.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 125192355 125192433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125192516 125192626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125193223 125193419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGCAGGGAGTGTCCCTTGGGCGGCAAGTAGGAGACTGTGGGGCTGGGTGCCCTCGGCATGCCGAAGCT
TCTCTCTGGGCGTCCCACGGTTGGCCTTCGTAAGGCTCACTCTTCCACCTCCCAAAGTGGTTGATCGCTG
GAACGAGAAGAGGGCTCTGTTTGGCGTCTACGACAACATTGGAATCCTGGGGAATTTCGAGAAGCACCCA
AAAGAACTGATCAAGGGCCCAGTATGGCTTCGAGGCTGGAGAGGAAATGAATTGCAGCGTTGTGTCCGAA
AGAAGAAATTTGTGGGAAACAGGATGTTCATTGAGGACCTGCATAACCTTAACAAACGGATCAGCTATCT
CTACAAACACTTTAACCGACATGGGAAGTACAGATAG

Translation (128 aa):
MAGSVPWAASRRLWGWVPSACRSFSLGVPRLAFVRLTLPPPKVVDRWNEKRALFGVYDNIGILGNFEKHP
KELIKGPVWLRGWRGNELQRCVRKKKFVGNRMFIEDLHNLNKRISYLYKHFNRHGKYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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