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Report for CCDS18536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18536.1 Public Mus musculus 4 Dmap1 23 108 98 CCDS HistoryNCBI Gene:66233Re-query CCDS DB by CCDS ID:18536.1Re-query CCDS DB by GeneID:66233See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18536.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102687.3 ENSMUSP00000099748.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102687.3Link to Ensembl Protein Viewer:ENSMUSP00000099748.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102687Re-query CCDS DB by Protein ID:ENSMUSP00000099748
Original member NCBI NM_023178.2 NP_075667.1 Updated not alive Link to Nucleotide Sequence:NM_023178.2Link to Protein Sequence:NP_075667.1Re-query CCDS DB by Nucleotide ID:NM_023178Re-query CCDS DB by Protein ID:NP_075667
Current member NCBI NM_023178.3 NP_075667.1 Accepted alive Link to Nucleotide Sequence:NM_023178.3Link to Protein Sequence:NP_075667.1Re-query CCDS DB by Nucleotide ID:NM_023178Re-query CCDS DB by Protein ID:NP_075667Link to BLAST:NP_075667.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075667.1 468 Q9JI44-1 468 100% 0 0

Chromosomal Locations for CCDS 18536.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117674735 117674794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117675021 117675316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117675427 117675499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117675732 117675803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117675950 117676135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117676350 117676517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117676609 117676767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117680843 117681038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117681274 117681365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117681833 117681937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGCTACGGGCGCAGATGTACGAGACATTCTAGAACTCGGGGGTCCAGAGGGAGATGCCGCCTCTGGGA
CCATCAGCAAAAAGGATATTATCAACCCGGACAAGAAAAAGTCCAAGAAGTCCTCAGAGACGCTGACCTT
CAAGAGGCCTGAGGGCATGCATCGGGAGGTCTATGCTTTGCTTTACTCTGACAAAAAGGATGCACCCCCA
CTGCTGCCCAGTGACACTGGTCAGGGGTATCGGACAGTGAAGGCGAAACTGGGGTCCAAGAAGGTTCGCC
CTTGGAAATGGATGCCTTTTACTAACCCAGCTCGAAAGGACGGCGCTATGTTTTTCCACTGGCGACGAGC
GGCGGAGGAGGGCAAGGACTACCCTTTTGCCAGGTTCAATAAGACGGTGCAGGTGCCCGTGTACTCAGAG
CAGGAGTACCAACTCTACCTTCATGATGACGCATGGACTAAGGCAGAGACTGACCACCTATTTGACCTCA
GCCGCCGATTTGATCTGCGCTTCGTAGTTATTCACGATCGGTATGACCACCAGCAGTTCAAGAAGCGTTC
TGTGGAGGACCTGAAAGAGAGGTACTACCACATTTGTGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGC
ACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGACGGCGGAAGGAACAGCTAGAGCGGCTTT
ACAACCGAACCCCAGAGCAGGTGGCAGAGGAGGAGTACCTCCTACAGGAGCTGCGTAAGATTGAGGCCCG
GAAAAAAGAGCGGGAGAAGCGCAGCCAAGACCTGCAGAAGCTGATTACAGCAGCAGACACCACTGCAGAG
CAGCGGCGCACGGAACGCAAGGCTCCCAAGAAGAAGCTACCCCAAAAGAAGGAGGCTGAGAAGCCGGCTG
TCCCTGAGACTGCAGGCATCAAGTTTCCAGATTTTAAGTCGGCAGGTGTCACGCTACGGAGCCAGCGGAT
GAAGCTACCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGAACTTGGTGTG
GAGCTGAGCCCTACCCCCACAGAGGAGCTGGTGCATATGTTCAATGAGTTGCGGAGCGACCTGGTGTTAC
TCTACGAGCTCAAGCAGGCCTGTGCCAACTGTGAATATGAGCTACAGATGCTGCGGCACCGGCACGAGGC
CCTGGCTCGGGCAGGAGTGCTGGGGGCCCCTGCCGCAGCAGCAGTGGGACCAACCCCGGCTTCTGCTGAG
CCAACAGTGTCTGAATCTGGACTTGGTCTGGACCCCACCAAGGATACCATCATTGATGTCGTGGGTGCAC
CCCTCACACCCAATTCGCGGAAACGACGGGAATCAGCCTCCAGCTCATCTTCTGTGAAGAAAGCCAAGAA
ACCATAA

Translation (468 aa):
MATGADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSDKKDAPP
LLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYPFARFNKTVQVPVYSE
QEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPG
TDLKIPVFDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAE
QRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKIKALEQMLLELGV
ELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEALARAGVLGAPAAAAVGPTPASAE
PTVSESGLGLDPTKDTIIDVVGAPLTPNSRKRRESASSSSSVKKAKKP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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