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Report for CCDS17706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17706.1 Public Mus musculus 3 Wnt2b 23 108 98 CCDS HistoryNCBI Gene:22414Re-query CCDS DB by CCDS ID:17706.1Re-query CCDS DB by GeneID:22414See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 17706.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029429.5 ENSMUSP00000029429.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029429.5Link to Ensembl Protein Viewer:ENSMUSP00000029429.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000029429Re-query CCDS DB by Protein ID:ENSMUSP00000029429
Original member Current member NCBI NM_009520.3 NP_033546.2 Accepted alive Link to Nucleotide Sequence:NM_009520.3Link to Protein Sequence:NP_033546.2Re-query CCDS DB by Nucleotide ID:NM_009520Re-query CCDS DB by Protein ID:NP_033546Link to BLAST:NP_033546.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033546.2 389 O70283 389 100% 0 0

Chromosomal Locations for CCDS 17706.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 104946971 104947200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 104951012 104951276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 104952915 104953192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 104954624 104954844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 104961297 104961472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGCTGAAGCTGCAGGGTGAGGATGAAGCCGCGCAGCTCGCCCCTCGGCGTGCCCGCGTCCCCGTGCCCA
GACCCACGGCCCCCGACGTGTCCCCATCTTCCGCCCGCCTGGGTCTTGCCTGCCTGCTGCTGCTGCTACT
CCTGACTCTGCCGGCCCGTGTAGACACGTCCTGGTGGTACATAGGGGCTCTGGGAGCCCGAGTGATCTGT
GACAACATCCCCGGTCTGGTGAGCCGGCAGCGGCAGTTGTGTCAACGCTACCCAGACATCATGCGCTCAG
TAGGTGAGGGTGCCCGGGAATGGATCCGAGAGTGCCAGCACCAGTTCCGTCACCACCGCTGGAATTGCAC
CACACTGGACCGGGACCACACTGTCTTTGGCCGCGCCATGCTCAGAAGCAGCCGGGAGGCAGCGTTCGTC
TATGCTATCTCGTCAGCAGGAGTGGTCCACGCTATCACTCGGGCCTGCAGCCAGGGTGAGCTGAGCGTGT
GCAGCTGTGACCCATATACCCGCGGTCGGCACCATGATCAACGAGGGGACTTTGACTGGGGTGGCTGTAG
TGACAACATCCATTACGGTGTTCGCTTTGCCAAGGCTTTTGTGGATGCCAAAGAGAAGAGGCTTAAGGAT
GCCCGGGCCCTCATGAACTTACACAACAACCGCTGTGGTCGCACGGCTGTTCGGAGATTCCTGAAGCTGG
AGTGCAAGTGTCACGGTGTGAGTGGCTCCTGTACTCTGCGCACCTGCTGGAGAGCACTCTCAGACTTCCG
ACGCACAGGTGACTACCTGAGGAGGCGATATGATGGGGCTGTGCAGGTGACGGCCACACAGGATGGGGCC
AATTTCACAGCAGCGCGCCAGGGCTATCGCCACGCCACCCGGACTGATCTTGTCTACTTTGACAACTCCC
CTGACTACTGTGTCTTGGACAAGGCTGCAGGTTCCCTAGGTACCGCAGGCCGCGTCTGCAGCAAGACTTC
TAAAGGAACAGATGGGTGTGAAATCATGTGTTGTGGCCGAGGGTATGACACAACTCGGGTCACCCGCGTC
ACCCAGTGTGAGTGCAAATTCCACTGGTGCTGTGCTGTGCGGTGCAAGGAGTGCAGAAACACTGTGGATG
TCCACACATGCAAGGCCCCTAAGAAGGCAGAGTGGCTGGACCAGACCTGA

Translation (389 aa):
MLKLQGEDEAAQLAPRRARVPVPRPTAPDVSPSSARLGLACLLLLLLLTLPARVDTSWWYIGALGARVIC
DNIPGLVSRQRQLCQRYPDIMRSVGEGAREWIRECQHQFRHHRWNCTTLDRDHTVFGRAMLRSSREAAFV
YAISSAGVVHAITRACSQGELSVCSCDPYTRGRHHDQRGDFDWGGCSDNIHYGVRFAKAFVDAKEKRLKD
ARALMNLHNNRCGRTAVRRFLKLECKCHGVSGSCTLRTCWRALSDFRRTGDYLRRRYDGAVQVTATQDGA
NFTAARQGYRHATRTDLVYFDNSPDYCVLDKAAGSLGTAGRVCSKTSKGTDGCEIMCCGRGYDTTRVTRV
TQCECKFHWCCAVRCKECRNTVDVHTCKAPKKAEWLDQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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