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Report for CCDS16065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16065.1 Public Mus musculus 2 Dpp4 23 108 98 CCDS HistoryNCBI Gene:13482Re-query CCDS DB by CCDS ID:16065.1Re-query CCDS DB by GeneID:13482See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16065.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047812.7 ENSMUSP00000044050.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047812.7Link to Ensembl Protein Viewer:ENSMUSP00000044050.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000047812Re-query CCDS DB by Protein ID:ENSMUSP00000044050
Original member Current member NCBI NM_010074.3 NP_034204.1 Accepted alive Link to Nucleotide Sequence:NM_010074.3Link to Protein Sequence:NP_034204.1Re-query CCDS DB by Nucleotide ID:NM_010074Re-query CCDS DB by Protein ID:NP_034204Link to BLAST:NP_034204.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034204.1 760 P28843 760 100% 0 0

Chromosomal Locations for CCDS 16065.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 62332618 62332719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62334256 62334329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62334597 62334669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62345056 62345120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62347818 62347917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62348501 62348555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62352122 62352316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62354539 62354608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62356616 62356714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62356960 62357007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62358784 62358905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62359277 62359330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62360285 62360352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62360609 62360716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62362662 62362706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62364928 62365063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62372755 62372867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62374366 62374526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62378204 62378324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62379097 62379169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62379277 62379329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62385174 62385242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62386431 62386522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62387065 62387160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62411215 62411299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 62411786 62411791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2283 nt):
ATGAAGACACCGTGGAAGGTTCTTCTGGGACTGCTTGGTGTCGCTGCGCTTGTCACCATCATCACCGTGC
CAATAGTTCTGCTGAGCAAAGATGAAGCGGCAGCTGACAGCCGCAGAACGTATTCACTAGCTGACTATTT
AAAGAGTACCTTTCGGGTCAAGTCCTACTCTTTGTGGTGGGTTTCAGACTTTGAATACCTCTACAAACAA
GAGAACAATATCTTGCTGCTCAATGCTGAACATGGAAACAGCTCCATTTTCTTGGAGAACAGTACCTTTG
AAAGCTTTGGATATCATTCAGTGTCACCTGACCGACTGTTTGTTCTCTTGGAATACAACTACGTGAAGCA
ATGGAGACATTCCTACACAGCTTCATACAACATTTATGATGTGAATAAAAGACAGCTGATCACAGAAGAG
AAGATTCCAAATAATACACAGTGGATCACATGGTCACCAGAAGGTCATAAGTTGGCATATGTCTGGAAGA
ATGATATTTACGTTAAAGTTGAACCACACTTACCTAGTCATAGGATCACATCGACAGGAGAAGAAAATGT
AATATATAATGGAATAACTGACTGGGTTTATGAAGAGGAAGTCTTCGGTGCCTACTCTGCACTGTGGTGG
TCTCCAAACAACACGTTTCTAGCTTATGCCCAGTTTAACGACACAGGAGTGCCGCTCATTGAATACTCCT
TCTATTCTGATGAGTCACTGCAGTACCCCAAGACAGTGTGGATTCCATACCCAAAGGCAGGAGCTGTGAA
TCCAACTGTAAAGTTCTTTATTGTAAATATAGACTCTCTCAGCTCATCCTCTAGTGCGGCTCCCATCCAA
ATCCCTGCTCCTGCATCTGTGGCAAGAGGGGATCACTATTTATGTGATGTGGTGTGGGCTACAGAAGAAA
GAATTTCACTACAGTGGCTCAGGAGGATTCAGAACTATTCCGTGATGGCTATCTGTGACTATGATAAGAT
CAACCTAACGTGGAACTGTCCATCCGAGCAGCAGCATGTTGAAATGAGTACCACAGGCTGGGTCGGAAGA
TTTAGGCCCGCAGAACCTCACTTCACCTCTGATGGAAGCAGCTTCTATAAGATCATCAGCGACAAAGATG
GCTACAAACACATCTGCCACTTCCCGAAAGATAAGAAAGACTGTACATTTATTACAAAAGGAGCCTGGGA
AGTCATTAGTATCGAAGCTCTGACCAGCGATTATCTATACTACATTAGTAACCAATATAAAGAAATGCCA
GGAGGAAGAAATCTCTATAAAATTCAACTTACTGACCACACAAATGTGAAGTGCCTTAGTTGTGACCTGA
ATCCAGAAAGATGTCAGTATTATGCGGTATCATTTAGTAAAGAGGCAAAGTACTATCAGCTGGGATGTTG
GGGCCCCGGTCTGCCCCTCTACACTCTACATCGTAGCACGGATCATAAAGAGCTGCGAGTCCTGGAAGAC
AATTCTGCTTTGGATAGAATGCTGCAGGATGTCCAGATGCCTTCAAAAAAATTGGACTTCATTGTTTTGA
ATGAAACAAGATTTTGGTATCAAATGATCTTGCCCCCTCATTTTGATAAATCCAAGAAATATCCTCTACT
ATTAGATGTATATGCAGGTCCCTGTAGTCAAAAAGCAGATGCTTCCTTCAGACTGAACTGGGCCACTTAC
CTTGCAAGTACAGAAAACATCATAGTAGCTAGCTTTGACGGCAGAGGAAGTGGTTACCAAGGAGATAAGA
TCATGCATGCAATCAACAGAAGATTGGGAACACTGGAAGTTGAAGATCAAATTGAAGCAGCCAGGCAATT
TGTAAAAATGGGATTTGTGGATAGCAAGCGAGTTGCAATTTGGGGCTGGTCATATGGAGGGTATGTAACC
TCAATGGTCCTGGGATCGGGAAGTGGCGTGTTCAAGTGCGGAATAGCTGTGGCACCTGTGTCACGGTGGG
AGTACTATGACTCAGTGTACACAGAGCGTTACATGGGTCTCCCAATTCCAGAAGACAACCTTGACCATTA
CAGGAACTCAACAGTCATGAGCAGAGCTGAACATTTTAAACAAGTTGAGTACCTCCTTATTCATGGAACG
GCAGATGATAATGTTCACTTTCAGCAGTCAGCTCAGATCTCCAAAGCCCTGGTGGATGCTGGTGTGGATT
TCCAAGCAATGTGGTACACGGATGAAGACCACGGGATCGCTAGCAGCACAGCTCACCAGCACATCTATTC
CCACATGAGCCATTTCCTCCAGCAGTGCTTCTCCTTACACTAG

Translation (760 aa):
MKTPWKVLLGLLGVAALVTIITVPIVLLSKDEAAADSRRTYSLADYLKSTFRVKSYSLWWVSDFEYLYKQ
ENNILLLNAEHGNSSIFLENSTFESFGYHSVSPDRLFVLLEYNYVKQWRHSYTASYNIYDVNKRQLITEE
KIPNNTQWITWSPEGHKLAYVWKNDIYVKVEPHLPSHRITSTGEENVIYNGITDWVYEEEVFGAYSALWW
SPNNTFLAYAQFNDTGVPLIEYSFYSDESLQYPKTVWIPYPKAGAVNPTVKFFIVNIDSLSSSSSAAPIQ
IPAPASVARGDHYLCDVVWATEERISLQWLRRIQNYSVMAICDYDKINLTWNCPSEQQHVEMSTTGWVGR
FRPAEPHFTSDGSSFYKIISDKDGYKHICHFPKDKKDCTFITKGAWEVISIEALTSDYLYYISNQYKEMP
GGRNLYKIQLTDHTNVKCLSCDLNPERCQYYAVSFSKEAKYYQLGCWGPGLPLYTLHRSTDHKELRVLED
NSALDRMLQDVQMPSKKLDFIVLNETRFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADASFRLNWATY
LASTENIIVASFDGRGSGYQGDKIMHAINRRLGTLEVEDQIEAARQFVKMGFVDSKRVAIWGWSYGGYVT
SMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPIPEDNLDHYRNSTVMSRAEHFKQVEYLLIHGT
ADDNVHFQQSAQISKALVDAGVDFQAMWYTDEDHGIASSTAHQHIYSHMSHFLQQCFSLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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