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Report for CCDS16063.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
16063.1 |
Public |
Mus musculus |
2 |
Tbr1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 16063.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000048934.14 |
ENSMUSP00000046787.8 |
Accepted |
alive |
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NCBI |
NM_009322.3 |
NP_033348.2 |
Updated |
not alive |
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NCBI |
NM_009322.4 |
NP_033348.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_033348.2 |
681 |
Q64336 |
681 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 16063.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2046 nt): ATGCAGCTGGAGCATTGCCTCTCTCCTTCTATCATGCTCTCCAAGAAATTTCTCAATGTGAGCAGCAGCT ACCCACATTCGGGCGGATCTGAGCTTGTCTTGCATGATCATCCCATTATCTCGACCACTGACAACCTGGA GAGAAGTTCACCTTTGAAAAAAATTACCAGGGGGATGACGAATCAGTCAGATACAGACAATTTTCCTGAC TCCAAGGACTCACCAGGGGACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTTC GTCACAGTTTCGATGGCTCTGCTGCAGATCGTTACCTACTCTCTCAGTCCAGCCAGCCACAGTCTGCGGC CACCGCTCCCAGTGCCATGTTCCCGTACCCCAGCCAGCACGGACCGGCGCATCCCGCCTTCTCCATCGGC AGCCCCAGTCGCTACATGGCCCACCACCCGGTCATTACCAACGGAGCTTACAACAGCCTGCTGTCCAACT CTTCGCCGCAGGGCTACCCCACGGCCGGCTACCCCTACCCACAGCAGTACGGCCACTCCTACCAAGGAGC CCCTTTCTACCAGTTCTCCTCCACCCAGCCCGGGTTGGTGCCCGGCAAGGCGCAAGTATACCTGTGCAAC AGGCCACTTTGGCTGAAATTTCATCGGCATCAAACGGAGATGATCATCACTAAACAGGGAAGGCGCATGT TTCCCTTTTTGAGTTTTAACATTTCTGGTCTCGATCCCACCGCTCATTACAATATTTTTGTGGATGTGAT TTTGGCGGATCCCAATCACTGGAGGTTTCAAGGAGGCAAATGGGTTCCTTGTGGCAAAGCGGACACCAAT GTGCAAGGAAACCGGGTCTATATGCATCCGGATTCCCCCAACACTGGGGCTCACTGGATGCGGCAAGAAA TCTCTTTTGGAAAATTAAAACTTACCAACAACAAGGGAGCATCAAACAACAATGGGCAGATGGTGGTTTT ACAGTCCCTGCACAAGTACCAGCCCCGTCTGCACGTGGTGGAAGTGAATGAGGATGGCACAGAGGACACC AGCCAGCCAGGCCGAGTCCAGACGTTCACTTTTCCGGAGACTCAGTTCATCGCTGTCACCGCCTACCAGA ACACGGATATTACACAACTAAAAATAGATCATAACCCCTTTGCAAAAGGATTTCGAGATAACTATGACAC GATCTACACGGGCTGCGACATGGACCGCTTGACCCCGTCGCCCAACGACTCTCCGCGCTCGCAGATCGTG CCCGGCGCCCGCTACGCCATGGCCGGCTCTTTCCTGCAAGACCAGTTCGTGAGCAACTACGCCAAGGCCC GCTTCCACCCGGGCGCCGGCGCGGGTCCCGGGCCGGGCACGGACCGCAGCGTGCCGCACACCAACGGGCT GCTGTCCCCGCAGCAGGCCGAGGACCCGGGCGCGCCGTCGCCGCAGCGCTGGTTCGTCACGCCGGCCAAC AACCGGCTGGACTTCGCGGCCTCGGCCTACGACACGGCCACGGACTTCGCCGGCAACGCGGCCACGCTGC TGTCGTATGCGGCCGCGGGCGTGAAGGCGCTGCCCTTGCAGGCCGCGGGCTGCACGGGCCGCCCGCTCGG CTACTACGCCGACCCTTCGGGCTGGGGCGCGCGCAGCCCCCCGCAGTACTGCGGCGCCAAGTCGGGCTCC GTGCTCCCCTGCTGGCCCAACAGCGCCGCGGCCGCCGCGCGCATGGCCGGCGCCAACCCCTATCTGGGCG AGGAGGCCGAGGGCCTGGCGGCCGAGCGCTCGCCGCTGGCGCCCGCCGCCGAGGACGCCAAGCCCAAGGA CCTGTCCGACTCCAGCTGGATCGAGACGCCCTCCTCCATCAAATCCATCGACTCCAGCGACTCGGGGATT TACGAGCAGGCCAAGCGGAGGCGGATCTCGCCGGCTGACACGCCGGTGTCTGAGAGCTCGTCCCCGCTCA AGAGCGAGGTGCTGGCCCAGCGGGACTGCGAGAAGAACTGCGCCAAGGACATAGGCGGCTACTATGGCTT CTACTCGCACAGCTAG
Translation (681 aa): MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTDNLERSSPLKKITRGMTNQSDTDNFPD SKDSPGDVQRSKLSPVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAPSAMFPYPSQHGPAHPAFSIG SPSRYMAHHPVITNGAYNSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCN RPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTN VQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEVNEDGTEDT SQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYTGCDMDRLTPSPNDSPRSQIV PGARYAMAGSFLQDQFVSNYAKARFHPGAGAGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPAN NRLDFAASAYDTATDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGAKSGS VLPCWPNSAAAAARMAGANPYLGEEAEGLAAERSPLAPAAEDAKPKDLSDSSWIETPSSIKSIDSSDSGI YEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDIGGYYGFYSHS
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