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Report for CCDS15940.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15940.1 Public Mus musculus 2 Angptl2 23 108 98 CCDS HistoryNCBI Gene:26360Re-query CCDS DB by CCDS ID:15940.1Re-query CCDS DB by GeneID:26360See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15940.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004208.6 ENSMUSP00000004208.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004208.6Link to Ensembl Protein Viewer:ENSMUSP00000004208.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000004208Re-query CCDS DB by Protein ID:ENSMUSP00000004208
Original member Current member NCBI NM_011923.4 NP_036053.2 Accepted alive Link to Nucleotide Sequence:NM_011923.4Link to Protein Sequence:NP_036053.2Re-query CCDS DB by Nucleotide ID:NM_011923Re-query CCDS DB by Protein ID:NP_036053Link to BLAST:NP_036053.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036053.2 493 Q9R045 493 100% 0 0

Chromosomal Locations for CCDS 15940.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 33228216 33229032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33242200 33242393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33243679 33243949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 33246087 33246286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGAGGCCACTGTGTATGACCTACTGGTGGCTTGGACTGCTGGCCACGGTCGGAGCTGCTACAGGCCCAG
AGGCTGACGTTGAGGGCACAGAGGATGGTTCACAGAGAGAGTACATTTACCTCAACAGGTACAAGCGGGC
AGGTGAGTCCCCCGACAAGTGCACCTACACTTTCATTGTGCCCCAGCAGCGGGTCACAGGTGCCATTTGT
GTCAACTCCAAGGAGCCTGAGGTGCACCTGGAGAACCGTGTGCACAAGCAGGAGCTGGAGCTGCTCAACA
ATGAGCTGCTTAAGCAGAAGCGGCAGATCGAGACGCTGCAGCAGCTGGTAGAGGTAGACGGAGGCATCGT
GAGCGAGGTGAAGCTGCTGCGCAAGGAGAGCCGCAACATGAACTCGAGAGTCACGCAGCTGTACATGCAA
CTTCTACATGAGATCATTCGAAAGCGAGACAATGCGCTGGAGCTCTCCCAGCTGGAGAACAGGATCCTGA
ACCAGACAGCTGACATGCTGCAGCTGGCTAGCAAGTACAAGGACCTGGAGCACAAGTTCCAGCACCTGGC
TATGCTGGCACACAACCAATCAGAGGTCATTGCTCAGCTCGAAGAGCACTGCCAACGCGTACCTGCAGCC
AGGCCTATGCCCCAGCCACCCCCAGCAGCTCCACCTCGGGTCTACCAACCACCCACCTACAACCGCATCA
TCAACCAGATTTCCACCAATGAGATCCAGAGTGACCAGAATCTGAAGGTGCTGCCGCCCTCCTTGCCCAC
CATGCCTGCCCTTACCAGTCTCCCATCTTCCACTGATAAGCCATCAGGTCCATGGAGAGACTGCCTGCAA
GCCCTGGAAGATGGTCACAGCACCAGCTCCATCTACCTGGTGAAGCCTGAGAATACCAACCGCCTGATGC
AGGTGTGGTGTGACCAGAGACATGACCCTGGAGGTTGGACTGTCATCCAGAGACGCCTGGATGGCTCTGT
CAACTTCTTCAGGAACTGGGAGACCTATAAGCAAGGGTTTGGGAACATCGATGGTGAGTACTGGCTGGGC
CTGGAGAACATCTACTGGCTGACGAACCAAGGCAACTACAAACTGCTGGTAACCATGGAGGACTGGTCTG
GCCGTAAAGTCTTTGCTGAGTATGCCAGTTTCCGACTGGAGCCAGAAAGCGAGTACTATAAGCTGCGGCT
GGGGCGTTATCATGGCAATGCAGGCGACTCCTTTACCTGGCACAACGGCAAACAGTTTACCACCCTGGAC
AGGGACCATGATGTCTACACAGGAAACTGTGCCCACTATCAGAAGGGAGGATGGTGGTATAACGCCTGTG
CTCACTCCAACCTCAATGGGGTCTGGTACCGTGGGGGCCATTACCGGAGCAGATACCAGGACGGGGTCTA
CTGGGCTGAGTTCCGAGGAGGCTCTTACTCACTCAAGAAGGTGGTGATGATGATTCGGCCCAACCCCAAC
ACCTTCCACTAA

Translation (493 aa):
MRPLCMTYWWLGLLATVGAATGPEADVEGTEDGSQREYIYLNRYKRAGESPDKCTYTFIVPQQRVTGAIC
VNSKEPEVHLENRVHKQELELLNNELLKQKRQIETLQQLVEVDGGIVSEVKLLRKESRNMNSRVTQLYMQ
LLHEIIRKRDNALELSQLENRILNQTADMLQLASKYKDLEHKFQHLAMLAHNQSEVIAQLEEHCQRVPAA
RPMPQPPPAAPPRVYQPPTYNRIINQISTNEIQSDQNLKVLPPSLPTMPALTSLPSSTDKPSGPWRDCLQ
ALEDGHSTSSIYLVKPENTNRLMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLG
LENIYWLTNQGNYKLLVTMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYHGNAGDSFTWHNGKQFTTLD
RDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPN
TFH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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