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Report for CCDS1591.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1591.2 Public Homo sapiens 1 C1orf131 24 110 108 CCDS HistoryNCBI Gene:128061Re-query CCDS DB by CCDS ID:1591.2Re-query CCDS DB by GeneID:128061See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1591.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366649.7 ENSP00000355609.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366649.7Link to Ensembl Protein Viewer:ENSP00000355609.2Re-query CCDS DB by Nucleotide ID:ENST00000366649Re-query CCDS DB by Protein ID:ENSP00000355609
Original member Current member NCBI NM_152379.4 NP_689592.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152379.4Link to Protein Sequence:NP_689592.2Re-query CCDS DB by Nucleotide ID:NM_152379Re-query CCDS DB by Protein ID:NP_689592Link to BLAST:NP_689592.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689592.2 293 Q8NDD1-1 293 100% 0 0

Chromosomal Locations for CCDS 1591.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 231224279 231224414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231225471 231225523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231226739 231226825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231226973 231227068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231229150 231229209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231238857 231239188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 231241024 231241141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGAGGGTTGATTCCTCGGCTGACCCCACAATGTCGCAGGAGCAAGGGCCGGGGTCCTCCACGCCTCCCA
GTTCTCCGACACTTCTTGACGCTCTGCTCCAGAACCTTTACGACTTTGGAGGTACAGAAGGTGAAACAGA
ACAGAAGAAGATCATAAAGAAAAGGGAAAACAAGAAGAGAGATGTGATGGCTTCAGCGGCCTTGGCAGCA
GAGCCATCTCCCCTACCTGGTTCTCTCATAAGAGGCCAGAGGAAGAGCGCTTCGAGCTTCTTCAAGGAAC
TTAGAGAAGAGCGGCATTGTGCTCCTTCTGGGACCCCCACAGGACCAGAGATCCTTGCTGCTGCAGTTCC
TCCCTCTTCCCTAAAGAACAATAGGGAACAAGTAGAAGTGGTAGAATTTCACAGCAATAAAAAAAGAAAA
TTGACGCCAGATCATAACAAGAACACAAAGCAGGCTAATCCTAGTGTTTTGGAGAGAGATGTGGATACAC
AAGAATTTAACCTAGAAAAAGCTCGTTTAGAAGTGCACCGGTTTGGTATCACGGGTTATGGAAAAGGAAA
GGAGAGAATCCTGGAACAGGAACGTGCCATTATGCTGGGCGCTAAGCCTCCTAAAAAGAGTTATGTGAAT
TACAAGGTTTTACAGGAGCAAATTAAAGAAAAAAAGGCAGCAAAGGAAGAAGAAAAGAGACTGGCCCAAG
AAACAGATATTTTCAAGAAAAAGAAGAGGAAAGGACAGGAGGACAGGAAATCCAAAAAGAAGTCCGCTCC
CAGTATTTTGTCAAATGGACGGATTGGACAGGTTGGAAAATTCAAAAATGGAACACTGATTCTGAGCCCA
GTTGATATCAAGAAAATAAATTCTTCCAGAGTGGCCAAATGA

Translation (293 aa):
MRVDSSADPTMSQEQGPGSSTPPSSPTLLDALLQNLYDFGGTEGETEQKKIIKKRENKKRDVMASAALAA
EPSPLPGSLIRGQRKSASSFFKELREERHCAPSGTPTGPEILAAAVPPSSLKNNREQVEVVEFHSNKKRK
LTPDHNKNTKQANPSVLERDVDTQEFNLEKARLEVHRFGITGYGKGKERILEQERAIMLGAKPPKKSYVN
YKVLQEQIKEKKAAKEEEKRLAQETDIFKKKKRKGQEDRKSKKKSAPSILSNGRIGQVGKFKNGTLILSP
VDIKKINSSRVAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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