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Report for CCDS15906.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15906.1 Public Mus musculus 2 Plpp7 23 108 98 CCDS HistoryNCBI Gene:227721Re-query CCDS DB by CCDS ID:15906.1Re-query CCDS DB by GeneID:227721See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15906.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057423.5 ENSMUSP00000054337.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057423.5Link to Ensembl Protein Viewer:ENSMUSP00000054337.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000057423Re-query CCDS DB by Protein ID:ENSMUSP00000054337
Original member Current member NCBI NM_145521.4 NP_663496.1 Accepted alive Link to Nucleotide Sequence:NM_145521.4Link to Protein Sequence:NP_663496.1Re-query CCDS DB by Nucleotide ID:NM_145521Re-query CCDS DB by Protein ID:NP_663496Link to BLAST:NP_663496.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663496.1 271 Q91WB2 271 100% 0 0

Chromosomal Locations for CCDS 15906.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32095812 32096262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32109609 32109973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGCCAGCTTCCCAGAGCCGGGCCCGTGCCAGGGATCGCAACAATGTCCTCAACCGGGCTGAGTTCCTGT
CCCTGAACCAGCCCCCCAAGGGGACCCAGGAGCCCAGAAGCTCAGGTAGGAAGGCCTCGGGGCCCTCAAC
ACAACCCCCACCCTCCAGCGACGGGGCACGGGAGCGTCGCCAGTCACAGCAGCTGCCCGAGGAGGACTGC
ATGCAGCTGAACCCCTCATTCAAGGGCATCGCCTTCAACTCCCTGCTGGCTATTGACATCTGCATGTCCA
AGCGACTGGGGGTGTGTGCCGGCCGGGCTGCATCCTGGGCCAGCGCCCGCTCCATGGTCAAGCTCATTGG
CATCACAGGCCACGGCATTCCTTGGATCGGGGGCACCATCCTCTGCCTGGTGAGAAGCAGCACCCTGGCT
GGCCAAGAGGTGCTCATGAACCTGCTGCTAGCCCTGCTCTTGGACATCATGACAGTGGCTGGAGTCCAGA
AGCTCATCAAGCGCCGCGGCCCATATGAGACCAGCCCTGGGCTCCTGGACTACCTCACCATGGACATCTA
TGCCTTCCCTGCCGGCCACGCCAGCCGTGCCGCCATGGTGTCCAAGTTCTTCCTGAGCCACCTGGTGCTG
GCGGTGCCACTGCGCGTGCTGCTGGTGCTCTGGGCCTTCTGCGTGGGCTTGTCTCGGGTGATGATCGGAC
GCCACCACATTACAGACGTCATCTCAGGCTTCATCATCGGCTACTTCCAGTTCCGCCTGGTGGAGCTCGT
GTGGATGTCCTCCAACACCTGCCAGATGCTCATCTCTGCCTGGTGA

Translation (271 aa):
MPASQSRARARDRNNVLNRAEFLSLNQPPKGTQEPRSSGRKASGPSTQPPPSSDGARERRQSQQLPEEDC
MQLNPSFKGIAFNSLLAIDICMSKRLGVCAGRAASWASARSMVKLIGITGHGIPWIGGTILCLVRSSTLA
GQEVLMNLLLALLLDIMTVAGVQKLIKRRGPYETSPGLLDYLTMDIYAFPAGHASRAAMVSKFFLSHLVL
AVPLRVLLVLWAFCVGLSRVMIGRHHITDVISGFIIGYFQFRLVELVWMSSNTCQMLISAW


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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