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Report for CCDS15881.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15881.1 Public Mus musculus 2 Dolpp1 23 108 98 CCDS HistoryNCBI Gene:57170Re-query CCDS DB by CCDS ID:15881.1Re-query CCDS DB by GeneID:57170See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15881.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028209.14 ENSMUSP00000028209.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028209.14Link to Ensembl Protein Viewer:ENSMUSP00000028209.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000028209Re-query CCDS DB by Protein ID:ENSMUSP00000028209
Original member NCBI NM_020329.4 NP_065062.1 Updated not alive Link to Nucleotide Sequence:NM_020329.4Link to Protein Sequence:NP_065062.1Re-query CCDS DB by Nucleotide ID:NM_020329Re-query CCDS DB by Protein ID:NP_065062
Current member NCBI NM_020329.5 NP_065062.1 Accepted alive Link to Nucleotide Sequence:NM_020329.5Link to Protein Sequence:NP_065062.1Re-query CCDS DB by Nucleotide ID:NM_020329Re-query CCDS DB by Protein ID:NP_065062Link to BLAST:NP_065062.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065062.1 238 Q9JMF7 238 100% 0 0

Chromosomal Locations for CCDS 15881.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 30392437 30392512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30395659 30395759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30395977 30396061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30396153 30396252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30396432 30396530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30397019 30397147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30397468 30397557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 30399142 30399178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (717 nt):
ATGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACC
CTGCAGGTGATCTGTCTGGCCACCTCCTGGCCTACCTGAGCCTCAGCCCTATTTTTGTCGTTGTTGGTTT
TTTGACTCTCATCATATTCAAGCGGGAGCTACACACGATTTCATTCCTTGGGGGACTGGCACTGAATCAG
GGCGTCAACTGGCTGATCAAACACGTCATCCAGGAGCCTCGGCCCTGTGGAGGCCCACATACAGCAGTGG
GCACTAAGTACGGGATGCCCTCCAGCCATTCCCAGTTCATGTGGTTCTTCTCCGTCTACTCCTTCCTCTT
CCTGTATTTAAGAATGCACCAAACAAATAACGCCAGGTTCTTGGACTTGCTGTGGAGGCACGTGCTGTCT
CTAGGGCTCCTCACCGCGGCCTTTCTCGTCTCCTATAGCAGGGTCTACCTGCTGTACCACACCTGGAGCC
AGGTGTTTTATGGGGGCGTGGCTGGAAGCCTCATGGCCGTCGCCTGGTTCATCATCACGCAGGAAATCCT
CACTCCGTTGTTCCCCAGGATAGCAGCCTGGCCCATCTCCGAGTTTTTCCTCATCCGGGACACGAGCCTC
ATTCCCAATGTGCTCTGGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGAACAGACAGCGCAAACTTG
GAACAAAACTGCAGTGA

Translation (238 aa):
MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPIFVVVGFLTLIIFKRELHTISFLGGLALNQ
GVNWLIKHVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLS
LGLLTAAFLVSYSRVYLLYHTWSQVFYGGVAGSLMAVAWFIITQEILTPLFPRIAAWPISEFFLIRDTSL
IPNVLWFEYTVTRAEARNRQRKLGTKLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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