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Report for CCDS15820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15820.1 Public Mus musculus 2 Adamts13 23 108 98 CCDS HistoryNCBI Gene:279028Re-query CCDS DB by CCDS ID:15820.1Re-query CCDS DB by GeneID:279028See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15820.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102891.3 ENSMUSP00000099955.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102891.3Link to Ensembl Protein Viewer:ENSMUSP00000099955.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102891Re-query CCDS DB by Protein ID:ENSMUSP00000099955
Original member Current member NCBI NM_001001322.2 NP_001001322.1 Accepted alive Link to Nucleotide Sequence:NM_001001322.2Link to Protein Sequence:NP_001001322.1Re-query CCDS DB by Nucleotide ID:NM_001001322Re-query CCDS DB by Protein ID:NP_001001322Link to BLAST:NP_001001322.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001322.1 1426 Q769J6 1426 100% 0 0

Chromosomal Locations for CCDS 15820.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 26973537 26973653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26973929 26973998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26975622 26975770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26977966 26978049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26978299 26978423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26978551 26978697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26981069 26981215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26981663 26981825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26983024 26983128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26983848 26983999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26984100 26984163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26985423 26985549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26986526 26986674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26986989 26987109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26988339 26988419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26989238 26989419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26990310 26990445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26990526 26990655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26991262 26991447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26992875 26993067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26993907 26994030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26996523 26996652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 26996735 26996914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27004744 27004948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27005166 27005478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27006177 27006323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27006622 27006798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27008533 27008717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27009256 27009447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4281 nt):
ATGAGCCAGCTTTGCCTGTGGTTGACGTGCCAGCCTTGTTATGCTGTCAGTGTCAGAGGAATCCTCACTG
GTGCCATCTTCATTCTGGGCTGCTGGGGGCTCTCTGACTTCCAGAAGAGTCTTCTTCAAGATCTGGAGCC
CAAGGATGTGTCTTCTTACTTTGGCCACCATGCTGCTCCATTCACAGGCCATCCTCCCTCTCACCTCCAG
AGACTGAGACGGAGAAGGACTTTGGAGGACATTCTGCACCTGGAACTCCTGGTAGCTGTGGGCCCCGATG
TTTCCCGGGCTCATCAGGAGGACACAGAACGCTACGTGCTCACTAATCTCAATATCGGGTCAGAACTGTT
GAGAAACCCATCCCTGGGAGTCCAGTTCCAGGTGCACCTGGTGAAGCTAATCACCCTCTCTGACTCAGAG
AGTACTCCGAATATCACGGCCAACATCACCTCATCCTTGATGAGCGTCTGCGAGTGGAGCCAGACGATCA
ACCCCCACGATGACAGGGATCCAAGTCACGCTGACCTGATTCTCTATATCACCAGGTTTGACCTGGAGTT
GCCTGATGGCAACCAGCAGGTTCGGGGTGTCACCCAGCTGGGAGGTGCCTGCTCCCTTTCCTGGAGTTGC
CTTATCACTGAGGATACTGGCTTTGACCTGGGGGTCACCATCGCCCATGAGATTGGGCACAGCTTCGGGC
TGGACCATGATGGTGCTCCAGGTAGTGGCAGCACCTGCAAGGCCAGTGGCCACGTGATGGCGGCTGATGG
CGCAACACCTACTGGAGGGACCCTGGAGTGGTCTGCCTGCAGCCAAAGGCAGTTGCAGCACCTACTCAGC
ACAGGGCAAATGCACTGCTTCCAGGACCCACCTGGGCTGCAGTCAGGACTTACACGGCACCAGCTGATGG
CACAGCCTGGCCTCTACTACAGTGCAGATGATCAGTGCCGTGTGGCTTTCGGTTCTGGGGCTGTCGCCTG
CACCTTCTCCAGGGAGGGTCTGGATGTATGCCAGGCCCTGTCCTGCCACACAGACCCCTTGGACCAAAGC
AGCTGCAGCCGCCTCCTTGTTCCTCTCCTGGATGGGACAGAATGTGGTGTGGAGAAGTGGTGCTCCAAGG
CTCGCTGTCGCTCCCTAGCTGAGCTGGCTCCTGTGGCTGCAGTACATGGACACTGGTCTAGCTGGGGCCC
CCATAGTCCCTGCTCCCGATCCTGTGGAGGAGGTGTGATTACCAGGAGGCGGTGGTGCAACAACCCCAGG
CCTGCATTTGGGGGACGTGCATGTGTGGGTGAAGACCTCCAGGCTAAGATGTGCAACACGCAGGCTTGTG
AGAAGACTCAGCTGGAGTTCATGTCCGAGCAGTGTGCCCAGACAGACAGACAACCACTGCAACTTTCCCA
AGGCACTGCCTCCTTCTACCACTGGGATGCTGCTGTGCAGTATAGTCAAGGAGATACCCTGTGCAGACAC
ATGTGCTGGGCTGTTGGAGAAAGCTTCATTGTCAGCCGTGGGGACAGGTTCCTAGATGGGACCCGTTGTG
TGCCAAGTGGTCCTCAGGATGATGGGACCCTAAGCCTCTGTTTGTTGGGCAGCTGCAGGACCTTTGGCTG
TGATGGCAGGATGGACTCCCAGAAGGTTTGGGATGCGTGCCAGGTGTGTGGAGGAGACAACAGCACCTGC
AGCTCACGGAATGGTTCTTTCACAGCTGGGAGAGCCAGAGAATATGTCACGTTCCTGATTGTTACTCCCA
ACATGACCAACGCACACATTGTCAACCGCAGGCCTCTCTTCACACACTTGGCGGTGAGGATCCAGGGCCA
CTACATTGTGGCAGGGAAGACTAGCATCTCACCCAACACCACCTACCCTTCCCTTCTGGAGGACTACCGT
GTGGAATACAGAGTGACTCTCACTGAGGACCAGCTGCCCCACTTAGAGGAGATTCACATCCGGGGACCCG
TCCGGGATGACATTGAGATTCAGGTGTACAGACGATATGGAGGAGAATATGGGGATCTTACACACCCAGA
CATCACCTTTTCCTACTTTCAACTGAAGCAGCAGGCAGCCTGGGTATGGACCGCTAAGCGTGGACCCTGC
TCAGTGAGCTGTGGGGCAGGGCTGCGCTGGGTGACCTACAGCTGCCAGGATCAAGCTCAAGACAAGTGGG
TAAAGAACGCCCAGTGCCAAGGGAGCCCACAGCCACCTGCATGGCAAGAGCCTTGTGTCTCTGCCCCCTG
CTCCCCATATTGGGTAGCTGGGGACTTCAGCCCATGTAGCGTGTCTTGTGGCGGGGGCCTTCGGGAGCGG
TCACTGCGCTGTGTAGAGACCCAAGATGGCTTCTTAAAGACACTGCCACCTGCCCGGTGCAGAGCAGTAG
CCCAGCAGCCAGCAGCAGAAGTGGAAAACTGCAACTCCCAGCCCTGTCCCACCAGGTGGGAGGTGTCAGA
CCCTGGCCCTTGCATGTCATCTGCCTGTGAGGCAGGTCTGGACTCAAGGAATGTGACATGTGTGTCCAGG
GCGGGTGACCCGGAGAAGCCAGAAACTGCAGGCCCCTGCCGCACCGACGAGATGTCAGCTATGCTGGAGC
CCTGCTCCAGGAGCCTGTGTTCTCCAGGCTTGGGTCAGGTGGACAACACCATGTCTCTGGGAGAGGAGGC
TCCATCCCCGGTGGGCAGTGACAAGCCAGGGGCTCAGGCTGAGCATGTGTGGACCCCTCTGGTGGGGCTG
TGCTCCATCTCTTGTGGGAGAGGTCTGAAGGAACTGTATTTCCTGTGCATGGATTCTGTCCTCAAAATGC
CTGTCCAGGAAGAGCTATGCGGCTTGGCTAGTAAGCCCCCAAGCCGGTGGGAGGTCTGCAGGGCTCGCCC
CTGTCCTGCTCGGTGGGAGACTCAAGTCTTGGCACCGTGCCCGGTGACCTGTGGTGGGGGGCGAGTGCCA
CTGTCTGTTCGTTGTGTGCAGCTAGACCGTGGCCACCCGATATCTGTACCTCACTCCAAGTGCTCGCCAG
TGCCTAAGCCAGGCTCCTTCGAGGACTGCAGCCCTGAGCCTTGTCCTGCTAGATGGAAAGTCCTGTCCCT
TGGCCCATGCTCAGCCAGCTGTGGCCTTGGCACTGCCACACAAATGGTGGCCTGCATGCAGCTTGACCAG
GGCCATGACAATGAGGTGAATGAAACTTTCTGTAAGGCTCTAGTGCGGCCTCAGGCCAGTGTCCCCTGCC
TCATTGCTGACTGCGCATTCCGGTGGCACATCAGCGCCTGGACAGAGTGCTCTGTCTCCTGTGGGGACGG
TATTCAGCGCCGGCATGACACCTGCCTTGGACCCCAGGCCCAAGTGCCTGTGCCAGCCAATTTCTGCCAG
CACCTGCCCAAGCCAATGACCGTGAGAGGCTGCTGGGCTGGACCCTGTGCAGGGCAGGAGACCTCCAGCT
CACTGCCTCACAAGGAAGCTACTCTTCCCAGTCAGACCCAGGCTGCTGCTACTGTTGCTTCTCTGCAGTG
GTCCCAGCCCCGAGCCCGGACCCCCACCCTTTTCTCAGCCTCCCAGTCTCTGGGGCTCCAGGAAAACCTG
GAAGAGCATGGTGCCTGTGGAAGGCAGTACCTGGAGCCCACAGGAACCATTCACATGCGAGATCAAGGAC
GGCTAGACTGTGTGGTGGCCATTGGGAGACCTCTAGGTGAAGTGGTGACCCTACAAATCCTTGAGAGCTC
CCTCAAGTGTAGTGCAGGGGAGCAACTGCTGCTCTGGGGTAGGTTCACATGGAGGAAGACATGCAGGAAG
ATGCCTGGCATGACTTTCAGCACCAAAACCAACACAGTGGTGGTGAAGCAGCATCGTGTGCTGCCAGGGG
GTGGAGTGCTGCTACGGTACTGGAGTCAACCTGCCCCGGGGACCTTCTACAAAGAATGTGACAGGCAGCT
CTTTGGACCTCGGGGTGAAATTGTGAGTCCCTCACTGAGCCCAGACGGGAGGAAGGCAGGGACCTGCAGG
GTCTTCATCAGTGTGGCTCCACAGGCCCGCATTGCCATCCGCGCCCTGGCCAGTGATATGGGCACTGCTT
CTGAGGGGACCAATGCCAACTATGTCTCGATCAGGGACATCCACAGTCTGAGGACCACAACATTTTGGGG
GCAGCAGGTGCTCTACTGGGAGTCCGAAGGCAGCGAGGCTGAACTGGAGTTTAGCCCTGGCTTCCTGGAG
GCACATGCCAGTCTCCAGGGCGAGTATTGGACCATCTCACCTAGGACATCGGAACAGGACGACAGCCTGG
CTCTGTCCTAG

Translation (1426 aa):
MSQLCLWLTCQPCYAVSVRGILTGAIFILGCWGLSDFQKSLLQDLEPKDVSSYFGHHAAPFTGHPPSHLQ
RLRRRRTLEDILHLELLVAVGPDVSRAHQEDTERYVLTNLNIGSELLRNPSLGVQFQVHLVKLITLSDSE
STPNITANITSSLMSVCEWSQTINPHDDRDPSHADLILYITRFDLELPDGNQQVRGVTQLGGACSLSWSC
LITEDTGFDLGVTIAHEIGHSFGLDHDGAPGSGSTCKASGHVMAADGATPTGGTLEWSACSQRQLQHLLS
TGQMHCFQDPPGLQSGLTRHQLMAQPGLYYSADDQCRVAFGSGAVACTFSREGLDVCQALSCHTDPLDQS
SCSRLLVPLLDGTECGVEKWCSKARCRSLAELAPVAAVHGHWSSWGPHSPCSRSCGGGVITRRRWCNNPR
PAFGGRACVGEDLQAKMCNTQACEKTQLEFMSEQCAQTDRQPLQLSQGTASFYHWDAAVQYSQGDTLCRH
MCWAVGESFIVSRGDRFLDGTRCVPSGPQDDGTLSLCLLGSCRTFGCDGRMDSQKVWDACQVCGGDNSTC
SSRNGSFTAGRAREYVTFLIVTPNMTNAHIVNRRPLFTHLAVRIQGHYIVAGKTSISPNTTYPSLLEDYR
VEYRVTLTEDQLPHLEEIHIRGPVRDDIEIQVYRRYGGEYGDLTHPDITFSYFQLKQQAAWVWTAKRGPC
SVSCGAGLRWVTYSCQDQAQDKWVKNAQCQGSPQPPAWQEPCVSAPCSPYWVAGDFSPCSVSCGGGLRER
SLRCVETQDGFLKTLPPARCRAVAQQPAAEVENCNSQPCPTRWEVSDPGPCMSSACEAGLDSRNVTCVSR
AGDPEKPETAGPCRTDEMSAMLEPCSRSLCSPGLGQVDNTMSLGEEAPSPVGSDKPGAQAEHVWTPLVGL
CSISCGRGLKELYFLCMDSVLKMPVQEELCGLASKPPSRWEVCRARPCPARWETQVLAPCPVTCGGGRVP
LSVRCVQLDRGHPISVPHSKCSPVPKPGSFEDCSPEPCPARWKVLSLGPCSASCGLGTATQMVACMQLDQ
GHDNEVNETFCKALVRPQASVPCLIADCAFRWHISAWTECSVSCGDGIQRRHDTCLGPQAQVPVPANFCQ
HLPKPMTVRGCWAGPCAGQETSSSLPHKEATLPSQTQAAATVASLQWSQPRARTPTLFSASQSLGLQENL
EEHGACGRQYLEPTGTIHMRDQGRLDCVVAIGRPLGEVVTLQILESSLKCSAGEQLLLWGRFTWRKTCRK
MPGMTFSTKTNTVVVKQHRVLPGGGVLLRYWSQPAPGTFYKECDRQLFGPRGEIVSPSLSPDGRKAGTCR
VFISVAPQARIAIRALASDMGTASEGTNANYVSIRDIHSLRTTTFWGQQVLYWESEGSEAELEFSPGFLE
AHASLQGEYWTISPRTSEQDDSLALS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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