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Report for CCDS15612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15612.1 Public Mus musculus 1 Angel2 23 108 98 CCDS HistoryNCBI Gene:52477Re-query CCDS DB by CCDS ID:15612.1Re-query CCDS DB by GeneID:52477See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15612.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066632.13 ENSMUSP00000064556.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066632.13Link to Ensembl Protein Viewer:ENSMUSP00000064556.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000066632Re-query CCDS DB by Protein ID:ENSMUSP00000064556
Original member Current member NCBI NM_021421.4 NP_067396.3 Accepted alive Link to Nucleotide Sequence:NM_021421.4Link to Protein Sequence:NP_067396.3Re-query CCDS DB by Nucleotide ID:NM_021421Re-query CCDS DB by Protein ID:NP_067396Link to BLAST:NP_067396.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067396.3 544 Q8K1C0-1 544 100% 0 0

Chromosomal Locations for CCDS 15612.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 190928700 190928758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190932867 190933192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190937444 190937700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190939087 190939156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190940874 190941295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190942121 190942247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190942830 190942887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190943777 190943940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 190944940 190945091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGAGACGTGGCGCTGTGTGAGGAGGGGCTACGGCCGCTGTGTGGCGGGGCGAGGCCGATACTCCATGT
TTCCCTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTG
GCGCAGACACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGT
AGCAGGCATTTCTCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATA
ATTGGAGATCTGACCACCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAG
AGATGAGCCCTTATCTAAACGAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGC
CATAATAAAGAAAATACGAAGGACCTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATA
AGTTTGACTTCTCAGTGATGTCTTATAACATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTA
CAGACATTGCCGACGTCCAGTGTTACACTGGAGTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACAT
TTTGATGCAGATGTGCTTTGTCTACAGGAAGTTCAAGAAGATCATTATGGGACAGAAATCAGGCCAAGTC
TGGAATCACTGGGTTATCATTGTGAATATAAAATGAAAACAGGAAGGAAGCCCGACGGCTGTGCCATCTG
CTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACCCAGTGGAGTTCTGCCGCCGCGACATTCCTCTG
CTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCCAAGATCCCACGCGCTGCCTCTCCATCCA
TCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGACATTAAGCTGACCCAGCTGGCAAT
GCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCTGTCCTATTGTCATGTGTGGT
GACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAATTAAATTATGAAGGTC
TTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTG
GCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAGAAAAAACA
GACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCCTCGC
ATCTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGT
GACCACCTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACT
GCTCAGGGGCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAA
CAGAGCAAGACTTGTGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCT
GGCCAAGTTCAGGCTTGAGCTCTGA

Translation (544 aa):
METWRCVRRGYGRCVAGRGRYSMFPYPLKSLGRDWTTPWEDLQKYCWRRHISSCLRWPGHYSRAPYPYFS
SRHFSLNCRPPFLFESGTQFQYYNWRSDHLSNASLIHLSRHVMTSDRDEPLSKRRKHQGTIKRNWEYLCS
HNKENTKDLEDRNVDSTCEDREDKFDFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKH
FDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSRFSLLSVNPVEFCRRDIPL
LDRDNIGLVLLLQPKIPRAASPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRKDGSSCPIVMCG
DFNSVPGSPLYSFIKEGKLNYEGLAIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEAQQVPKVEKT
DSDVTQAQQEKAEVPVSADKVSSHLQHGFSLSSVYSHYVPDTGVPEVTTCHSRSAITVDYIFYTAKKENT
AQGPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNEHNSSDHLPLLAKFRLEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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