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Report for CCDS14957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14957.1 Public Mus musculus 1 Hecw2 23 108 98 CCDS HistoryNCBI Gene:329152Re-query CCDS DB by CCDS ID:14957.1Re-query CCDS DB by GeneID:329152See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 14957.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097741.2 ENSMUSP00000095348.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097741.2Link to Ensembl Protein Viewer:ENSMUSP00000095348.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000097741Re-query CCDS DB by Protein ID:ENSMUSP00000095348
Original member Current member NCBI NM_172655.3 NP_766243.2 Accepted alive Link to Nucleotide Sequence:NM_172655.3Link to Protein Sequence:NP_766243.2Re-query CCDS DB by Nucleotide ID:NM_172655Re-query CCDS DB by Protein ID:NP_766243Link to BLAST:NP_766243.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766243.2 294 Q6I6G8-2 294 100% 0 0

Chromosomal Locations for CCDS 14957.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 53930966 53931109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53933119 53933288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53937058 53937133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53942706 53942800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53950814 53950921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54040201 54040492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGGCTAGCTCAGCCCGGGAGCATTTGCTTTTTGTGCGGCGTCGAAATCCACAGATGCGGTACACACTGA
GCCCAGAGAACCTCCAGAGCCTGGCAGCCCAGAACTCAATGCCCGAGAACATGGCCCTACAGCGGGCCAA
CAGTGACACGGATCTGGTGACTTCTGAGAGCCGCTCCAGCCTGACTGCCAGCATGTACGAATACACGCTG
GGGCAAGCCCAGAACCTCATTATCTTCTGGGACATTAAGGAAGAGGTTGACCCCAGCGATTGGATAGGAC
TCTATCACATAGATGAGAATTCTCCAGCCAACTTCTGGGACTCTAAAAACAGGGGTGTGACTGGAACCCA
AAAAGGACAAATTGTATGGCGAATTGAGCCTGGGCCCTACTTCATGGAACCGGAGATCAAAATCTGTTTC
AAATACTACCATGGTATTAGTGGAGCCCTGCGAGCCACAACCCCCTGTATTACCGTGAAGAACCCAGCTG
TGATGATGGGGGCCGAAGGCATGGAAGGAGGTGCTTCAGGAAGCCTGCACTCTAGGAAACTCGTCAGCTT
CACATTGTCAGATCTCAGGGCAGTTGGGCTCAAGAAAGGGATGTTCTTCAATCCTGACCCTTATCTTAAG
ATGTCCATTCAGCCAGGGAAGAAGAGCAGTTTTCCTACCTGCGCCCACCATGGGCAGGAGAGAAGGTCCA
CTATCATCAGCAACACCACCAATCCGATCTGGCACAGAGAGAAATACTCCTTTTTTGCACTTTTGACTGA
TGTCTTAGAAATTGAAATCAAAGACAAATTTGCCAAGAGCCGGCCCATCATCAAACGCTTCCTGGGGAAA
CTAACCATTCCAGTGCAGAGGCTGCTGGAGCGGCAGGCTGGGTAA

Translation (294 aa):
MASSAREHLLFVRRRNPQMRYTLSPENLQSLAAQNSMPENMALQRANSDTDLVTSESRSSLTASMYEYTL
GQAQNLIIFWDIKEEVDPSDWIGLYHIDENSPANFWDSKNRGVTGTQKGQIVWRIEPGPYFMEPEIKICF
KYYHGISGALRATTPCITVKNPAVMMGAEGMEGGASGSLHSRKLVSFTLSDLRAVGLKKGMFFNPDPYLK
MSIQPGKKSSFPTCAHHGQERRSTIISNTTNPIWHREKYSFFALLTDVLEIEIKDKFAKSRPIIKRFLGK
LTIPVQRLLERQAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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