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Report for CCDS14927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14927.1 Public Mus musculus 1 Mettl21c 23 108 98 CCDS HistoryNCBI Gene:433294Re-query CCDS DB by CCDS ID:14927.1Re-query CCDS DB by GeneID:433294See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 14927.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061421.3 ENSMUSP00000061229.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061421.3Link to Ensembl Protein Viewer:ENSMUSP00000061229.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000061421Re-query CCDS DB by Protein ID:ENSMUSP00000061229
Original member Current member NCBI NM_001013799.1 NP_001013821.1 Accepted alive Link to Nucleotide Sequence:NM_001013799.1Link to Protein Sequence:NP_001013821.1Re-query CCDS DB by Nucleotide ID:NM_001013799Re-query CCDS DB by Protein ID:NP_001013821Link to BLAST:NP_001013821.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013821.1 248 Q8BLU2 248 100% 0 0

Chromosomal Locations for CCDS 14927.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44009639 44010033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44010532 44010649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44013622 44013773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44017186 44017267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGATCAGCATCTCCACATAGCCCAGCAGCCCCTACTCTCGGGGACTCCACAGGAAGATGGTTTTGCAG
GACCCTCAGTAGAGTTCGACAGGATAGAATCATCTCTTCGTAGCATCCAGAAATTTGTTCCTACAGACTA
TGCCAGCTACACACAAGAGCATTATCAGTTCGCAGGCAAGAAGATCATCATTCAAGAATCCATTGAGAAC
TATGGCACAGTGGTGTGGCCAGGGGCTACAGCTCTGTGTCAATATTTAGAAGACCATACAGAGGAATTAA
ATCTCCAAGATGCTAAAATACTTGAAATTGGTGCTGGAGCAGGCCTTGTTTCCATTGTATCCAGTCTTTT
AGGAGCTCAAGTCACAGCAACAGACCTGCCTGATGTTCTAGGAAATCTTCAATACAATATTTTAAAAAAC
ACACTAGAATGCACAGCTCATCTACCTGAAGTGAGAGAACTGGTATGGGGGGAAGACCTGGAGCAGAGCT
TCCCTAAGTCAACCTGTTGTTATGACTACGTGCTGGCCTCTGATGTTGTCTACCACCACTACTTCCTGGA
CAAGCTGCTCGCTACCATGGTGTACCTTTCCCAGCCAGGCACTGTGGTGCTGTGGGCAAACAAATTCAGA
TTTAGTGCTGACTATGAATTTTTAGGTAAGTTTAAGCAAGCCTTTGATACCACTCTCTTGGCTGAATATT
CAGAATCATCTGTCAAGCTGTTTAAAGGGATATTAAAGTGGGAGTGA

Translation (248 aa):
MDQHLHIAQQPLLSGTPQEDGFAGPSVEFDRIESSLRSIQKFVPTDYASYTQEHYQFAGKKIIIQESIEN
YGTVVWPGATALCQYLEDHTEELNLQDAKILEIGAGAGLVSIVSSLLGAQVTATDLPDVLGNLQYNILKN
TLECTAHLPEVRELVWGEDLEQSFPKSTCCYDYVLASDVVYHHYFLDKLLATMVYLSQPGTVVLWANKFR
FSADYEFLGKFKQAFDTTLLAEYSESSVKLFKGILKWE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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