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Report for CCDS14483.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14483.3 Public Homo sapiens X RPL36A 24 110 108 CCDS HistoryNCBI Gene:6173Re-query CCDS DB by CCDS ID:14483.3Re-query CCDS DB by GeneID:6173See the combined annotation on chromosome X in Sequence Viewer

Public Note for CCDS 14483.2
The coding region has been updated to start at a downstream in-frame start codon that is supported by transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14483.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000553110.8 ENSP00000446503.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000553110.8Link to Ensembl Protein Viewer:ENSP00000446503.2Re-query CCDS DB by Nucleotide ID:ENST00000553110Re-query CCDS DB by Protein ID:ENSP00000446503
Original member Current member NCBI NM_021029.6 NP_066357.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021029.6Link to Protein Sequence:NP_066357.3Re-query CCDS DB by Nucleotide ID:NM_021029Re-query CCDS DB by Protein ID:NP_066357Link to BLAST:NP_066357.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066357.3 106 P83881 106 100% 0 0

Chromosomal Locations for CCDS 14483.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101391044 101391046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101391459 101391564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101391755 101391822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101395335 101395457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101395728 101395748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGGTTAACGTCCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAACCCCATAAAGTGA
CACAGTACAAGAAGGGCAAGGATTCTCTGTACGCCCAGGGAAAGCGGCGTTATGACAGGAAGCAGAGTGG
CTATGGTGGGCAAACTAAGCCGATTTTCCGGAAAAAGGCTAAAACTACAAAGAAGATTGTGCTAAGGCTT
GAGTGCGTTGAGCCCAACTGCAGATCTAAGAGAATGCTGGCTATTAAAAGATGCAAGCATTTTGAACTGG
GAGGAGATAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTAA

Translation (106 aa):
MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRL
ECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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