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Report for CCDS14102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14102.1 Public Homo sapiens 22 RABL2B 24 110 108 CCDS HistoryNCBI Gene:11158Re-query CCDS DB by CCDS ID:14102.1Re-query CCDS DB by GeneID:11158See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395598.7 ENSP00000378962.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395598.7Link to Ensembl Protein Viewer:ENSP00000378962.3Re-query CCDS DB by Nucleotide ID:ENST00000395598Re-query CCDS DB by Protein ID:ENSP00000378962
Original member Current member EBI ENST00000435118.5 ENSP00000401906.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435118.5Link to Ensembl Protein Viewer:ENSP00000401906.1Re-query CCDS DB by Nucleotide ID:ENST00000435118Re-query CCDS DB by Protein ID:ENSP00000401906
Original member Current member NCBI NM_001130922.3 NP_001124394.1 Accepted alive Link to Nucleotide Sequence:NM_001130922.3Link to Protein Sequence:NP_001124394.1Re-query CCDS DB by Nucleotide ID:NM_001130922Re-query CCDS DB by Protein ID:NP_001124394Link to BLAST:NP_001124394.1
Original member Current member NCBI NM_001350005.2 NP_001336934.1 Accepted alive Link to Nucleotide Sequence:NM_001350005.2Link to Protein Sequence:NP_001336934.1Re-query CCDS DB by Nucleotide ID:NM_001350005Re-query CCDS DB by Protein ID:NP_001336934Link to BLAST:NP_001336934.1
Original member Current member NCBI NM_001350006.2 NP_001336935.1 Accepted alive Link to Nucleotide Sequence:NM_001350006.2Link to Protein Sequence:NP_001336935.1Re-query CCDS DB by Nucleotide ID:NM_001350006Re-query CCDS DB by Protein ID:NP_001336935Link to BLAST:NP_001336935.1
Original member Current member NCBI NM_001350007.2 NP_001336936.1 Accepted alive Link to Nucleotide Sequence:NM_001350007.2Link to Protein Sequence:NP_001336936.1Re-query CCDS DB by Nucleotide ID:NM_001350007Re-query CCDS DB by Protein ID:NP_001336936Link to BLAST:NP_001336936.1
Original member Current member NCBI NM_007081.4 NP_009012.1 Accepted alive Link to Nucleotide Sequence:NM_007081.4Link to Protein Sequence:NP_009012.1Re-query CCDS DB by Nucleotide ID:NM_007081Re-query CCDS DB by Protein ID:NP_009012Link to BLAST:NP_009012.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124394.1 228 Q9UNT1-1 228 100% 0 0
NP_001336934.1 228 Q9UNT1-1 228 100% 0 0
NP_001336935.1 228 Q9UNT1-1 228 100% 0 0
NP_001336936.1 228 Q9UNT1-1 228 100% 0 0
NP_009012.1 228 Q9UNT1-1 228 100% 0 0

Chromosomal Locations for CCDS 14102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50768776 50768874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769041 50769124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769455 50769549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769905 50770016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50775772 50775851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50776670 50776749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50777952 50777981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50782188 50782294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGCAGAAGACAAAACCAAACCGAGTGAGTTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGA
TCATCTGCCTGGGAGACAGCGCAGTGGGCAAATCCAAACTCATGGAGAGATTTCTCATGGATGGCTTTCA
GCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACAAGCACACAGCCACGGTAGATGGAAGGACCATC
CTTGTGGACTTTTGGGACACGGCAGGCCAGGAGCGGTTCCAGAGCATGCATGCCTCCTACTACCACAAGG
CCCACGCCTGCATCATGGTGTTTGATGTACAGAGGAAAGTCACCTATAGGAACCTGAGCACCTGGTATAC
AGAGCTTCGGGAGTTCAGGCCAGAGATCCCATGCATCGTGGTGGCCAATAAAATTGATGACATAAACGTG
ACCCAAAAAAGCTTCAATTTTGCCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATGGTA
CCAATGTTGTGAAGCTCTTCAATGATGCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGACTT
CATGGATGAGATTTTTCAGGAGCTCGAGAACTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGACCAG
GAACAGAGCAGCAGCATCGAGACCCCATCAGAGGAGGCGGCCTCTCCCCACAGCTGA

Translation (228 aa):
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTI
LVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPEIPCIVVANKIDDINV
TQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQ
EQSSSIETPSEEAASPHS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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