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Report for CCDS1321.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1321.2 Public Homo sapiens 1 RASAL2 24 110 108 CCDS HistoryNCBI Gene:9462Re-query CCDS DB by CCDS ID:1321.2Re-query CCDS DB by GeneID:9462See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 1321.1
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript data. The update also extends the protein N-terminus.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1321.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367649.8 ENSP00000356621.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367649.8Link to Ensembl Protein Viewer:ENSP00000356621.3Re-query CCDS DB by Nucleotide ID:ENST00000367649Re-query CCDS DB by Protein ID:ENSP00000356621
Original member Current member NCBI NM_170692.4 NP_733793.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_170692.4Link to Protein Sequence:NP_733793.2Re-query CCDS DB by Nucleotide ID:NM_170692Re-query CCDS DB by Protein ID:NP_733793Link to BLAST:NP_733793.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733793.2 1280 Q9UJF2-2 1280 100% 0 0

Chromosomal Locations for CCDS 1321.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 178094493 178094694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178283564 178283691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178299992 178300118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178390100 178390206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178420511 178420620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178439422 178439575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178441549 178441647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178442675 178443229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178445518 178445662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178451571 178451715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178452416 178452652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178454447 178454648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178456721 178456899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178457683 178458544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178464278 178464412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178465920 178466122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178467334 178467421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 178473075 178473239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3843 nt):
ATGGAGCTCTCTCCGTCGTCCGGAGGAGCCGCGGAGGCGCTGTCCTGGCCGGAGATGTTCCCGGCGCTGG
AGTCCGACTCGCCGCTGCCCCCGGAGGACCTGGACGCGGTTGTCCCAGTCAGTGGAGCCGTCGCCGGTGG
CATGTTGGATCGGATCCTTCTGGAGTCCGTGTGCCAGCAACAGAGCTGGGTCCGGGTGTACGATGTGAAA
GGACCACCCACCCACCGTCTGTCTTGTGGTCAGTCACCCTACACCGAGACAACAACGTGGGAGCGGAAGT
ATTGCATCCTCACAGACAGCCAGTTGGTATTGCTCAACAAGGAGAAGGAGATACCTGTGGAAGGGGGACA
GGAGCAGCAGACAGATTCCACCAAAGGGCGATGCCTGAGGAGAACTGTCAGTGTCCCTTCCGAGGGTCAG
TTTCCCGAGTACCCACCAGAGGGCGCCACTAAACTGGAGGTACCAGCAGAAAGGTCCCCTCGTAGACGGA
GTATCTCAGGGACCAGTACATCAGAGAAACCCAACTCCATGGACACTGCAAATACCTCACCCTTCAAAGT
ACCAGGATTCTTCAGCAAGCGCCTGAAAGGCTCCATCAAGAGGACCAAAAGCCAGTCAAAGCTTGACAGA
AACACGAGCTTTCGGCTTCCATCCCTTCGCAGTACAGATGACAGGTCTCGTGGGCTGCCTAAACTAAAAG
AGTCACGTTCCCATGAATCCTTGCTGAGCCCATGCAGCACAGTGGAATGTCTGGATCTTGGTAGAGGGGA
ACCTGTATCAGTGAAACCACTTCATAGTAGCATCCTTGGACAAGACTTCTGCTTTGAGGTTACCTACTTA
AGTGGAAGTAAATGCTTCAGCTGTAATTCTGCTTCTGAGAGAGACAAGTGGATGGAAAACCTTCGCAGGA
CAGTTCAACCTAATAAGGACAATTGCAGGCGAGCTGAAAATGTTCTTCGTTTATGGATCATTGAAGCCAA
GGACCTTGCCCCTAAAAAGAAATATTTCTGCGAACTGTGCCTTGATGATACCCTCTTTGCTCGTACAACC
AGCAAGACCAAAGCAGACAATATTTTCTGGGGCGAACATTTTGAATTCTTCAGCCTTCCACCTCTTCATA
GTATCACAGTTCACATTTACAAGGATGTGGAAAAAAAGAAAAAAAAGGACAAGAATAATTATGTAGGGCT
AGTCAACATCCCCACTGCCAGTGTGACTGGTCGCCAATTTGTAGAAAAGTGGTATCCAGTGAGTACACCT
ACACCCAACAAAGGAAAGACAGGAGGACCTTCTATTCGGATTAAATCACGTTTCCAAACTATCACCATTC
TGCCTATGGAGCAATACAAAGAATTTGCAGAATTTGTCACCAGCAACTACACCATGCTGTGTTCTGTCCT
TGAGCCAGTAATTAGTGTGAGAAATAAAGAGGAGTTGGCTTGTGCCTTAGTGCACATTCTTCAAAGTACT
GGCAGAGCCAAGGATTTTCTGACTGACTTGGTGATGTCTGAGGTGGATCGTTGTGGAGAGCATGATGTCT
TGATCTTCAGAGAGAACACTATTGCCACCAAATCCATTGAGGAATACCTCAAGTTGGTGGGACAACAGTA
TCTTCATGACGCACTGGGGGAGTTTATCAAAGCTTTGTATGAGTCCGATGAGAACTGTGAAGTGGATCCC
AGCAAATGTTCATCTAGTGAACTGATAGACCATCAGAGCAACCTGAAAATGTGCTGTGAGCTGGCTTTCT
GCAAGATCATCAACTCTTACTGTGTTTTCCCTCGTGAGTTGAAAGAAGTGTTTGCATCATGGAAGCAGCA
GTGCCTGAACCGTGGCAAGCAAGACATCAGCGAGAGGCTCATCAGTGCCTCATTATTTCTCCGTTTTCTG
TGTCCAGCCATTATGTCTCCCAGTCTTTTCAACCTTATGCAGGAGTATCCTGATGACCGCACATCTCGGA
CTCTAACTCTTATTGCCAAGGTCATTCAGAACCTGGCCAACTTTGCCAAGTTTGGTAACAAAGAGGAATA
CATGGCATTCATGAATGATTTTTTAGAACATGAATGGGGTGGAATGAAGCGCTTTCTTTTGGAGATCTCT
AATCCAGACACCATCTCAAACACCCCAGGCTTTGATGGTTACATTGATCTGGGCCGAGAGCTTTCAGTTT
TGCATTCCTTACTGTGGGAAGTAGTTTCCCAACTTGATAAGGCGACCGTGGCAAAATTGGGGCCTCTCCC
TCGTGTTCTTGCTGATATTACCAAGTCATTGACTAATCCTACGCCAATACAACAGCAACTGAGACGCTTC
ACTGAACATAACTCCAGTCCAAATGTCAGTGGAAGCCTCTCCTCTGGGCTGCAGAAAATATTTGAAGACC
CCACTGACAGTGATTTGCATAAACTAAAATCTCCAAGCCAGGACAACACAGACAGCTACTTCAGAGGGAA
AACATTATTGCTGGTTCAGCAAGCCTCCTCTCAGAGCATGACTTATTCTGAAAAGGATGAAAGGGAAAGT
AGCCTTCCTAATGGTCGGAGCGTCTCCCTCATGGACCTCCAGGACACTCATGCTGCTCAAGTGGAGCATG
CATCTGTCATGCTTGATGTGCCTATACGCTTGACCGGAAGCCAGCTTTCCATAACCCAGGTGGCCAGCAT
CAAACAGCTGCGGGAAACCCAGAGCACTCCCCAAAGTGCACCCCAAGTGAGAAGGCCCCTGCACCCAGCC
TTGAACCAGCCAGGTGGCCTTCAGCCCTTGTCGTTCCAGAACCCTGTCTATCACCTCAATAACCCAATTC
CAGCAATGCCAAAGGCCTCTATAGATTCCAGTTTGGAGAACCTAAGCACTGCCAGTTCCAGAAGCCAAAG
TAACAGTGAAGACTTCAAGCTCAGTGGACCCAGCAATAGCAGCATGGAAGATTTCACTAAACGTAGCACT
CAGAGTGAGGACTTCTCCAGGCGGCACACGGTGCCAGATAGACACATACCTCTTGCTTTGCCACGACAAA
ATAGTACTGGGCAGGCCCAGATCCGAAAAGTGGACCAGGGTGGGTTAGGTGCCCGAGCCAAAGCCCCACC
ATCCCTGCCACACAGTGCTTCTTTACGTAGCACCGGGAGCATGTCAGTGGTGTCCGCAGCCCTGGTGGCC
GAACCTGTGCAGAATGGGAGCCGGTCCCGGCAGCAGTCCTCTTCCTCCAGAGAGAGCCCTGTTCCCAAAG
TTAGAGCAATCCAGAGACAACAGACACAGCAGGTTCAGTCACCTGTGGACTCTGCCACAATGTCCCCAGT
AGAGAGGACAGCAGCCTGGGTTCTGAACAATGGGCAGTATGAAGAGGATGTGGAAGAAACTGAGCAAAAT
CTAGATGAAGCCAAGCATGCTGAGAAGTATGAACAAGAAATTACTAAACTGAAGGAGCGCCTGAGAGTTT
CCAGCCGGCGACTGGAGGAATATGAACGCCGCTTGCTGGTGCAGGAGCAGCAGATGCAGAAGCTGCTGCT
GGAATACAAGGCCCGACTGGAGGACAGCGAGGAGCGGCTCCGAAGACAGCAGGAAGAAAAAGATAGCCAG
ATGAAAAGCATCATCAGCAGGCTAATGGCTGTGGAAGAGGAACTGAAGAAGGATCATGCTGAGATGCAAG
CAGTTATTGATGCAAAGCAGAAAATAATTGATGCACAGGAAAAACGGATCGTGTCCCTGGATTCAGCCAA
CACCAGACTGATGAGCGCGCTGACCCAAGTGAAGGAGCGGTACAGCATGCAGGTCCGCAATGGCATCTCC
CCCACCAACCCCACCAAGCTTTCCATCACGGAGAATGGTGAATTCAAAAACAGCAGCTGCTGA

Translation (1280 aa):
MELSPSSGGAAEALSWPEMFPALESDSPLPPEDLDAVVPVSGAVAGGMLDRILLESVCQQQSWVRVYDVK
GPPTHRLSCGQSPYTETTTWERKYCILTDSQLVLLNKEKEIPVEGGQEQQTDSTKGRCLRRTVSVPSEGQ
FPEYPPEGATKLEVPAERSPRRRSISGTSTSEKPNSMDTANTSPFKVPGFFSKRLKGSIKRTKSQSKLDR
NTSFRLPSLRSTDDRSRGLPKLKESRSHESLLSPCSTVECLDLGRGEPVSVKPLHSSILGQDFCFEVTYL
SGSKCFSCNSASERDKWMENLRRTVQPNKDNCRRAENVLRLWIIEAKDLAPKKKYFCELCLDDTLFARTT
SKTKADNIFWGEHFEFFSLPPLHSITVHIYKDVEKKKKKDKNNYVGLVNIPTASVTGRQFVEKWYPVSTP
TPNKGKTGGPSIRIKSRFQTITILPMEQYKEFAEFVTSNYTMLCSVLEPVISVRNKEELACALVHILQST
GRAKDFLTDLVMSEVDRCGEHDVLIFRENTIATKSIEEYLKLVGQQYLHDALGEFIKALYESDENCEVDP
SKCSSSELIDHQSNLKMCCELAFCKIINSYCVFPRELKEVFASWKQQCLNRGKQDISERLISASLFLRFL
CPAIMSPSLFNLMQEYPDDRTSRTLTLIAKVIQNLANFAKFGNKEEYMAFMNDFLEHEWGGMKRFLLEIS
NPDTISNTPGFDGYIDLGRELSVLHSLLWEVVSQLDKATVAKLGPLPRVLADITKSLTNPTPIQQQLRRF
TEHNSSPNVSGSLSSGLQKIFEDPTDSDLHKLKSPSQDNTDSYFRGKTLLLVQQASSQSMTYSEKDERES
SLPNGRSVSLMDLQDTHAAQVEHASVMLDVPIRLTGSQLSITQVASIKQLRETQSTPQSAPQVRRPLHPA
LNQPGGLQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSNSEDFKLSGPSNSSMEDFTKRST
QSEDFSRRHTVPDRHIPLALPRQNSTGQAQIRKVDQGGLGARAKAPPSLPHSASLRSTGSMSVVSAALVA
EPVQNGSRSRQQSSSSRESPVPKVRAIQRQQTQQVQSPVDSATMSPVERTAAWVLNNGQYEEDVEETEQN
LDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQEQQMQKLLLEYKARLEDSEERLRRQQEEKDSQ
MKSIISRLMAVEEELKKDHAEMQAVIDAKQKIIDAQEKRIVSLDSANTRLMSALTQVKERYSMQVRNGIS
PTNPTKLSITENGEFKNSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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