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Report for CCDS12957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12957.1 Public Homo sapiens 19 ZNF211 24 110 108 CCDS HistoryNCBI Gene:10520Re-query CCDS DB by CCDS ID:12957.1Re-query CCDS DB by GeneID:10520See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347302.7 ENSP00000339562.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347302.7Link to Ensembl Protein Viewer:ENSP00000339562.3Re-query CCDS DB by Nucleotide ID:ENST00000347302Re-query CCDS DB by Protein ID:ENSP00000339562
Original member Current member NCBI NM_198855.4 NP_942152.1 Accepted alive Link to Nucleotide Sequence:NM_198855.4Link to Protein Sequence:NP_942152.1Re-query CCDS DB by Nucleotide ID:NM_198855Re-query CCDS DB by Protein ID:NP_942152Link to BLAST:NP_942152.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_942152.1 564 Q13398-1 564 100% 0 0

Chromosomal Locations for CCDS 12957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57633347 57633436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57634629 57634755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57640704 57642181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGCTCGGGTTCCCCCCGGGTCGCCCGCAGCTCCCGGTCCAGCTCCGCCCACAGACTCGGATGGCGACCG
CACTGAGGGACCCGGCTTCGGGAAGTGTGACCTTTGAAGATGTGGCCGTGTACTTCTCCTGGGAGGAATG
GGATCTCCTTGATGAGGCTCAGAAACACCTGTACTTCGATGTGATGCTGGAGAACTTTGCACTTACGTCC
TCCCTGGGTTGTTGGTGTGGAGTGGAACATGAGGAAACACCTTCTGAACAGAGAATTTCTGGAGAAAGAG
TGCCACAGTTCAGGACTTCCAAAGAAGGTTCATCTTCCCAGAATGCCGACTCCTGTGAAATATGTTGCCT
GGTCTTGAGAGATATTTTGCACTTGGCTGAACACCAAGGAACAAACTGCGGGCAGAAACTACACACATGT
GGAAAACAATTCTACATCAGTGCAAATCTTCAACAGCACCAGAGGCAGCACATTACAGAGGCACCTTTCA
GAAGTTATGTGGACACTGCCTCGTTTACACAGAGTTGCATAGTCCATGTGTCGGAGAAACCCTTTACCTG
CAGGGAGATCAGGAAAGACTTCCTGGCCAACATGAGGTTTCTCCATCAAGACGCCACTCAAACAGGGGAG
AAGCCAAATAACAGTAACAAGTGTGCGGTGGCCTTTTACAGTGGAAAAAGTCATCACAACTGGGGAAAAT
GCAGTAAAGCCTTTAGCCACATAGACACACTTGTTCAGGACCAGAGAATCCTCACTAGAGAAGGACTTTT
TGAGTGCAGTAAATGTGGGAAAGCATGTACGCGAAGATGTAACCTCATTCAGCACCAGAAAGTCCACAGT
GAAGAAAGGCCTTATGAATGCAATGAATGTGGAAAATTCTTTACCTACTACTCCAGTTTCATTATACATC
AGAGAGTTCATACTGGAGAAAGGCCTTATGCGTGCCCTGAATGTGGGAAATCGTTTAGTCAGATATACAG
CCTCAATAGCCATAGGAAAGTTCACACTGGAGAAAGGCCTTATGAATGTGGGGAATGTGGGAAATCTTTT
AGCCAAAGGTCCAACCTCATGCAGCATCGCAGAGTTCACACTGGAGAAAGGCCTTATGAATGCAGCGAAT
GTGGGAAATCTTTTAGCCAAAACTTTAGCCTGATCTACCACCAGAGAGTTCACACTGGAGAAAGACCTCA
TGAGTGCAATGAATGTGGAAAATCCTTTAGCCGAAGCTCCAGCCTCATTCACCACCGGAGACTTCACACT
GGAGAAAGACCCTATGAGTGCAGTAAATGTGGGAAGTCATTTAAGCAAAGCTCCAGCTTCAGTTCACATC
GGAAAGTCCACACAGGGGAAAGGCCTTATGTGTGTGGGGAATGTGGGAAATCCTTTAGCCATAGCTCCAA
CCTTAAGAACCACCAGAGAGTTCACACTGGAGAAAGACCTGTTGAGTGCAGTGAATGTAGCAAATCCTTT
AGCTGTAAATCTAACCTCATTAAACACCTGAGAGTTCACACTGGAGAAAGGCCTTATGAGTGCAGTGAAT
GTGGGAAATCCTTTAGCCAAAGTTCTAGCCTCATTCAACACCGCAGAGTTCACACGGGAAAAAGGCCTTA
TCAGTGCAGTCAATGTGGGAAATCCTTTGGCTGCAAATCTGTCCTCATTCAACACCAGAGAGTTCACATT
GGAGAAAAGCCTTAG

Translation (564 aa):
MLGFPPGRPQLPVQLRPQTRMATALRDPASGSVTFEDVAVYFSWEEWDLLDEAQKHLYFDVMLENFALTS
SLGCWCGVEHEETPSEQRISGERVPQFRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTC
GKQFYISANLQQHQRQHITEAPFRSYVDTASFTQSCIVHVSEKPFTCREIRKDFLANMRFLHQDATQTGE
KPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCNLIQHQKVHS
EERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVHTGERPYECGECGKSF
SQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHT
GERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSF
SCKSNLIKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHI
GEKP


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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