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Report for CCDS11818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11818.1 Public Homo sapiens 17 FN3K 24 110 108 CCDS HistoryNCBI Gene:64122Re-query CCDS DB by CCDS ID:11818.1Re-query CCDS DB by GeneID:64122See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300784.8 ENSP00000300784.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300784.8Link to Ensembl Protein Viewer:ENSP00000300784.7Re-query CCDS DB by Nucleotide ID:ENST00000300784Re-query CCDS DB by Protein ID:ENSP00000300784
Original member Current member NCBI NM_022158.4 NP_071441.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022158.4Link to Protein Sequence:NP_071441.1Re-query CCDS DB by Nucleotide ID:NM_022158Re-query CCDS DB by Protein ID:NP_071441Link to BLAST:NP_071441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071441.1 309 Q9H479 309 100% 0 0

Chromosomal Locations for CCDS 11818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 82735637 82735777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82738489 82738640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82740763 82740854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82741311 82741393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82748855 82748977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82750417 82750755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAGCAGCTGCTGCGCGCCGAGCTGCGCACCGCGACCCTGCGGGCCTTCGGCGGCCCCGGCGCCGGCT
GCATCAGCGAGGGCCGAGCCTACGACACGGACGCAGGCCCAGTGTTCGTCAAAGTCAACCGCAGGACGCA
GGCCCGGCAGATGTTTGAGGGGGAGGTGGCCAGCCTGGAGGCCCTCAGGAGCACGGGCCTGGTGCGGGTG
CCGAGGCCCATGAAGGTCATCGACCTGCCGGGAGGTGGGGCCGCCTTTGTGATGGAGCATTTGAAGATGA
AGAGCTTGAGCAGTCAAGCATCAAAACTTGGAGAGCAGATGGCAGATTTGCATCTTTACAACCAGAAGCT
CAGGGAGAAGTTGAAGGAGGAGGAGAACACAGTGGGCCGAAGAGGTGAGGGTGCTGAGCCTCAGTATGTG
GACAAGTTCGGCTTCCACACGGTGACGTGCTGCGGCTTCATCCCGCAGGTGAATGAGTGGCAGGATGACT
GGCCGACCTTTTTCGCCCGGCACCGGCTCCAGGCGCAGCTGGACCTCATTGAGAAGGACTATGCTGACCG
AGAGGCACGAGAACTCTGGTCCCGGCTACAGGTGAAGATCCCGGATCTGTTTTGTGGCCTAGAGATTGTC
CCCGCGTTGCTCCACGGGGATCTCTGGTCGGGAAACGTGGCTGAGGACGACGTGGGGCCCATTATTTACG
ACCCGGCTTCCTTCTATGGCCATTCCGAGTTTGAACTGGCAATCGCCTTGATGTTTGGGGGGTTCCCCAG
ATCCTTCTTCACCGCCTACCACCGGAAGATCCCCAAGGCTCCGGGCTTCGACCAGCGGCTGCTGCTCTAC
CAGCTGTTTAACTACCTGAACCACTGGAACCACTTCGGGCGGGAGTACAGGAGCCCTTCCTTGGGCACCA
TGCGAAGGCTGCTCAAGTAG

Translation (309 aa):
MEQLLRAELRTATLRAFGGPGAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLEALRSTGLVRV
PRPMKVIDLPGGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKLKEEENTVGRRGEGAEPQYV
DKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLIEKDYADREARELWSRLQVKIPDLFCGLEIV
PALLHGDLWSGNVAEDDVGPIIYDPASFYGHSEFELAIALMFGGFPRSFFTAYHRKIPKAPGFDQRLLLY
QLFNYLNHWNHFGREYRSPSLGTMRRLLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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