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Report for CCDS1168.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1168.1 Public Homo sapiens 1 FCRL2 24 110 108 CCDS HistoryNCBI Gene:79368Re-query CCDS DB by CCDS ID:1168.1Re-query CCDS DB by GeneID:79368See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1168.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361516.8 ENSP00000355157.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361516.8Link to Ensembl Protein Viewer:ENSP00000355157.3Re-query CCDS DB by Nucleotide ID:ENST00000361516Re-query CCDS DB by Protein ID:ENSP00000355157
Original member Current member NCBI NM_030764.4 NP_110391.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030764.4Link to Protein Sequence:NP_110391.2Re-query CCDS DB by Nucleotide ID:NM_030764Re-query CCDS DB by Protein ID:NP_110391Link to BLAST:NP_110391.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110391.2 508 Q96LA5-1 508 100% 0 0

Chromosomal Locations for CCDS 1168.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 157746736 157746774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157746871 157746899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157748553 157748618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157748875 157748960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157749650 157749677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157766855 157766971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157767231 157767509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157768414 157768701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157769866 157770150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157770409 157770666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157775775 157775795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157777043 157777073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGCTGCTGTGGTCATTGCTGGTCATCTTTGATGCAGTCACTGAACAGGCAGATTCGCTGACCCTTGTGG
CGCCCTCTTCTGTCTTCGAAGGAGACAGCATCGTTCTGAAATGCCAGGGAGAACAGAACTGGAAAATTCA
GAAGATGGCTTACCATAAGGATAACAAAGAGTTATCTGTTTTCAAAAAATTCTCAGATTTCCTTATCCAA
AGTGCAGTTTTAAGTGACAGTGGTAACTATTTCTGTAGTACCAAAGGACAACTCTTTCTCTGGGATAAAA
CTTCAAATATAGTAAAGATAAAAGTCCAAGAGCTCTTTCAACGTCCTGTGCTGACTGCCAGCTCCTTCCA
GCCCATCGAAGGGGGTCCAGTGAGCCTGAAATGTGAGACCCGGCTCTCTCCACAGAGGTTGGATGTTCAA
CTCCAGTTCTGCTTCTTCAGAGAAAACCAGGTCCTGGGGTCAGGCTGGAGCAGCTCTCCGGAGCTCCAGA
TTTCTGCCGTGTGGAGTGAAGACACAGGGTCTTACTGGTGCAAGGCAGAAACGGTGACTCACAGGATCAG
AAAACAGAGCCTCCAATCCCAGATTCACGTGCAGAGAATCCCCATCTCTAATGTAAGCTTGGAGATCCGG
GCCCCCGGGGGACAGGTGACTGAAGGACAAAAACTGATCCTGCTCTGCTCAGTGGCTGGGGGTACAGGAA
ATGTCACATTCTCCTGGTACAGAGAGGCCACAGGAACCAGTATGGGAAAGAAAACCCAGCGTTCCCTGTC
AGCAGAGCTGGAGATCCCAGCTGTGAAAGAGAGTGATGCCGGCAAATATTACTGTAGAGCTGACAACGGC
CATGTGCCTATCCAGAGCAAGGTGGTGAATATCCCTGTGAGAATTCCAGTGTCTCGCCCTGTCCTCACCC
TCAGGTCTCCTGGGGCCCAGGCTGCAGTGGGGGACCTGCTGGAGCTTCACTGTGAGGCCCTGAGAGGCTC
TCCCCCAATCTTGTACCAATTTTATCATGAGGATGTCACCCTTGGGAACAGCTCGGCCCCCTCTGGAGGA
GGGGCCTCCTTCAACCTCTCTTTGACTGCAGAACATTCTGGAAACTACTCCTGTGAGGCCAACAACGGCC
TGGGGGCCCAGTGCAGTGAGGCAGTGCCAGTCTCCATCTCAGGACCTGATGGCTATAGAAGAGACCTCAT
GACAGCTGGAGTTCTCTGGGGACTGTTTGGTGTCCTTGGTTTCACTGGTGTTGCTTTGCTGTTGTATGCC
TTGTTCCACAAGATATCAGGAGAAAGTTCTGCCACTAATGAACCCAGAGGGGCTTCCAGGCCAAATCCTC
AAGAGTTCACCTATTCAAGCCCAACCCCAGACATGGAGGAGCTGCAGCCAGTGTATGTCAATGTGGGCTC
TGTAGATGTGGATGTGGTTTATTCTCAGGTCTGGAGCATGCAGCAGCCAGAAAGCTCAGCAAACATCAGG
ACACTTCTGGAGAACAAGGACTCCCAAGTCATCTACTCTTCTGTGAAGAAATCATAA

Translation (508 aa):
MLLWSLLVIFDAVTEQADSLTLVAPSSVFEGDSIVLKCQGEQNWKIQKMAYHKDNKELSVFKKFSDFLIQ
SAVLSDSGNYFCSTKGQLFLWDKTSNIVKIKVQELFQRPVLTASSFQPIEGGPVSLKCETRLSPQRLDVQ
LQFCFFRENQVLGSGWSSSPELQISAVWSEDTGSYWCKAETVTHRIRKQSLQSQIHVQRIPISNVSLEIR
APGGQVTEGQKLILLCSVAGGTGNVTFSWYREATGTSMGKKTQRSLSAELEIPAVKESDAGKYYCRADNG
HVPIQSKVVNIPVRIPVSRPVLTLRSPGAQAAVGDLLELHCEALRGSPPILYQFYHEDVTLGNSSAPSGG
GASFNLSLTAEHSGNYSCEANNGLGAQCSEAVPVSISGPDGYRRDLMTAGVLWGLFGVLGFTGVALLLYA
LFHKISGESSATNEPRGASRPNPQEFTYSSPTPDMEELQPVYVNVGSVDVDVVYSQVWSMQQPESSANIR
TLLENKDSQVIYSSVKKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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