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Report for CCDS1065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1065.1 Public Homo sapiens 1 AQP10 24 110 108 CCDS HistoryNCBI Gene:89872Re-query CCDS DB by CCDS ID:1065.1Re-query CCDS DB by GeneID:89872See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324978.8 ENSP00000318355.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324978.8Link to Ensembl Protein Viewer:ENSP00000318355.3Re-query CCDS DB by Nucleotide ID:ENST00000324978Re-query CCDS DB by Protein ID:ENSP00000318355
Original member Current member NCBI NM_080429.3 NP_536354.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080429.3Link to Protein Sequence:NP_536354.2Re-query CCDS DB by Nucleotide ID:NM_080429Re-query CCDS DB by Protein ID:NP_536354Link to BLAST:NP_536354.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_536354.2 301 Q96PS8-1 301 100% 0 0

Chromosomal Locations for CCDS 1065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 154321156 154321260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154321933 154322059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154322982 154323119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154323241 154323359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154323589 154323806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154324282 154324480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGGTCTTCACTCAGGCCCCGGCTGAAATCATGGGCCACCTCCGGATACGCAGCCTCCTGGCCCGGCAGT
GCCTGGCAGAGTTTCTGGGTGTGTTTGTACTCATGCTCCTCACCCAAGGAGCTGTGGCCCAGGCTGTCAC
CAGTGGAGAAACCAAAGGCAACTTCTTCACCATGTTTCTGGCTGGCTCTCTGGCCGTTACGATAGCCATC
TACGTGGGTGGTAACGTCTCAGGGGCCCACCTGAATCCAGCCTTCTCCCTGGCCATGTGCATCGTTGGAC
GCCTCCCCTGGGTCAAGCTCCCCATTTACATCTTGGTGCAGTTGCTGTCTGCTTTCTGTGCTTCGGGAGC
CACCTATGTTCTCTACCATGATGCCCTACAGAACTATACAGGTGGGAACCTGACAGTGACTGGCCCCAAG
GAGACAGCCTCCATTTTTGCCACCTATCCTGCCCCCTATCTGTCCCTGAACAATGGCTTCCTGGATCAGG
TTCTGGGCACTGGGATGCTGATTGTGGGGCTCTTGGCCATCCTGGACAGACGGAACAAGGGAGTCCCTGC
GGGTCTGGAGCCTGTGGTGGTGGGGATGCTGATCCTGGCCCTCGGGTTATCCATGGGTGCCAACTGCGGG
ATTCCACTCAACCCTGCCCGGGACCTGGGCCCACGTCTCTTCACCTACGTGGCTGGCTGGGGTCCTGAAG
TCTTCAGTGCTGGTAATGGCTGGTGGTGGGTGCCTGTGGTGGCCCCTCTGGTGGGGGCCACCGTTGGCAC
AGCCACTTACCAGCTGTTGGTGGCTCTGCACCACCCTGAGGGCCCAGAGCCAGCTCAGGATCTGGTGTCT
GCTCAACACAAAGCCTCAGAGTTGGAAACTCCTGCCTCAGCTCAGATGCTGGAGTGTAAGCTATGA

Translation (301 aa):
MVFTQAPAEIMGHLRIRSLLARQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAI
YVGGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPK
ETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILALGLSMGANCG
IPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATYQLLVALHHPEGPEPAQDLVS
AQHKASELETPASAQMLECKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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