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Report for CCDS10446.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10446.1 Public Homo sapiens 16 IGFALS 24 110 108 CCDS HistoryNCBI Gene:3483Re-query CCDS DB by CCDS ID:10446.1Re-query CCDS DB by GeneID:3483See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10446.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215539.4 ENSP00000215539.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215539.4Link to Ensembl Protein Viewer:ENSP00000215539.3Re-query CCDS DB by Nucleotide ID:ENST00000215539Re-query CCDS DB by Protein ID:ENSP00000215539
Original member Current member NCBI NM_004970.3 NP_004961.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004970.3Link to Protein Sequence:NP_004961.1Re-query CCDS DB by Nucleotide ID:NM_004970Re-query CCDS DB by Protein ID:NP_004961Link to BLAST:NP_004961.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004961.1 605 P35858-1 605 100% 0 0

Chromosomal Locations for CCDS 10446.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1790600 1792401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1793637 1793652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1818 nt):
ATGGCCCTGAGGAAAGGAGGCCTGGCCCTGGCGCTGCTGCTGCTGTCCTGGGTGGCACTGGGCCCCCGCA
GC
CTGGAGGGAGCAGACCCCGGAACGCCGGGGGAAGCCGAGGGCCCAGCGTGCCCGGCCGCCTGTGTCTG
C
AGCTACGATGACGACGCGGATGAGCTCAGCGTCTTCTGCAGCTCCAGGAACCTCACGCGCCTGCCTGAT
GGA
GTCCCGGGCGGCACCCAAGCCCTGTGGCTGGACGGCAACAACCTCTCGTCCGTCCCCCCGGCAGCCT
TC
CAGAACCTCTCCAGCCTGGGCTTCCTCAACCTGCAGGGCGGCCAGCTGGGCAGCCTGGAGCCACAGGC
G
CTGCTGGGCCTAGAGAACCTGTGCCACCTGCACCTGGAGCGGAACCAGCTGCGCAGCCTGGCACTCGGC
ACG
TTTGCACACACGCCCGCGCTGGCCTCGCTCGGCCTCAGCAACAACCGTCTGAGCAGGCTGGAGGACG
GG
CTCTTCGAGGGCCTCGGCAGCCTCTGGGACCTCAACCTCGGCTGGAATAGCCTGGCGGTGCTCCCCGA
T
GCGGCGTTCCGCGGCCTGGGCAGCCTGCGCGAGCTGGTGCTGGCGGGCAACAGGCTGGCCTACCTGCAG
CCC
GCGCTCTTCAGCGGCCTGGCCGAGCTCCGGGAGCTGGACCTGAGCAGGAACGCGCTGCGGGCCATCA
AG
GCAAACGTGTTCGTGCAGCTGCCCCGGCTCCAGAAACTCTACCTGGACCGCAACCTCATCGCTGCCGT
G
GCCCCGGGCGCCTTCCTGGGCCTGAAGGCGCTGCGATGGCTGGACCTGTCCCACAACCGCGTGGCTGGC
CTC
CTGGAGGACACGTTCCCCGGTCTGCTGGGCCTGCGTGTGCTGCGGCTGTCCCACAACGCCATCGCCA
GC
CTGCGGCCCCGCACCTTCAAGGACCTGCACTTCCTGGAGGAGCTGCAGCTGGGCCACAACCGCATCCG
G
CAGCTGGCTGAGCGCAGCTTTGAGGGCCTGGGGCAGCTTGAGGTGCTCACGCTAGACCACAACCAGCTC
CAG
GAGGTCAAGGCGGGCGCTTTCCTCGGCCTCACCAACGTGGCGGTCATGAACCTCTCTGGGAACTGTC
TC
CGGAACCTTCCGGAGCAGGTGTTCCGGGGCCTGGGCAAGCTGCACAGCCTGCACCTGGAGGGCAGCTG
C
CTGGGACGCATCCGCCCGCACACCTTCACCGGCCTCTCGGGGCTCCGCCGACTCTTCCTCAAGGACAAC
GGC
CTCGTGGGCATTGAGGAGCAGAGCCTGTGGGGGCTGGCGGAGCTGCTGGAGCTCGACCTGACCTCCA
AC
CAGCTCACGCACCTGCCCCACCGCCTCTTCCAGGGCCTGGGCAAGCTGGAGTACCTGCTGCTCTCCCG
C
AACCGCCTGGCAGAGCTGCCGGCGGACGCCCTGGGCCCCCTGCAGCGGGCCTTCTGGCTGGACGTCTCG
CAC
AACCGCCTGGAGGCATTGCCCAACAGCCTCTTGGCACCACTGGGGCGGCTGCGCTACCTCAGCCTCA
GG
AACAACTCACTGCGGACCTTCACGCCGCAGCCCCCGGGCCTGGAGCGCCTGTGGCTGGAGGGTAACCC
C
TGGGACTGTGGCTGCCCTCTCAAGGCGCTGCGGGACTTCGCCCTGCAGAACCCCAGTGCTGTGCCCCGC
TTC
GTCCAGGCCATCTGTGAGGGGGACGATTGCCAGCCGCCCGCGTACACCTACAACAACATCACCTGTG
CC
AGCCCGCCCGAGGTCGTGGGGCTCGACCTGCGGGACCTCAGCGAGGCCCACTTTGCTCCCTGCTGA


Translation (605 aa):
MALRKGGLALALLLLSWVALGPRSLEGADPGTPGEAEGPACPAACVCSYDDDADELSVFCSSRNLTRLPD
G
VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG
T
FAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQ
P
ALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAG
L
LEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQL
Q
EVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN
G
LVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVS
H
NRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLERLWLEGNPWDCGCPLKALRDFALQNPSAVPR
F
VQAICEGDDCQPPAYTYNNITCASPPEVVGLDLRDLSEAHFAPC




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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