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Report for CCDS10342.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10342.1 Public Homo sapiens 15 MRPS11 24 110 108 CCDS HistoryNCBI Gene:64963Re-query CCDS DB by CCDS ID:10342.1Re-query CCDS DB by GeneID:64963See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10342.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325844.9 ENSP00000317376.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325844.9Link to Ensembl Protein Viewer:ENSP00000317376.4Re-query CCDS DB by Nucleotide ID:ENST00000325844Re-query CCDS DB by Protein ID:ENSP00000317376
Original member Current member NCBI NM_022839.5 NP_073750.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022839.5Link to Protein Sequence:NP_073750.2Re-query CCDS DB by Nucleotide ID:NM_022839Re-query CCDS DB by Protein ID:NP_073750Link to BLAST:NP_073750.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073750.2 194 P82912-1 194 100% 0 0

Chromosomal Locations for CCDS 10342.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 88467718 88467782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88467908 88468024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88472627 88472725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88475110 88475239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88476989 88477054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88477872 88477979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGCAGGG
TCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCA
GAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGCATTTACCCTCCCATTCCAGGAGAGGAG
AGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAGCATCCCACAACA
ACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGGATT
TCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGAGCTAAA
CAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCAGGACGCTTGTCTGCCATGCACG
GACTGATCATGGGCGGCCTGGAAGTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCG
CCCCAGGAAGGCTCGGAAGCTGTGA

Translation (194 aa):
MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKFSIYPPIPGEE
SSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAK
QKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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