NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10192.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10192.2 Public Homo sapiens 15 CSNK1G1 24 110 108 CCDS HistoryNCBI Gene:53944Re-query CCDS DB by CCDS ID:10192.2Re-query CCDS DB by GeneID:53944See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10192.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303052.13 ENSP00000305777.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303052.13Link to Ensembl Protein Viewer:ENSP00000305777.7Re-query CCDS DB by Nucleotide ID:ENST00000303052Re-query CCDS DB by Protein ID:ENSP00000305777
Original member Current member NCBI NM_001329606.2 NP_001316535.1 Accepted alive Link to Nucleotide Sequence:NM_001329606.2Link to Protein Sequence:NP_001316535.1Re-query CCDS DB by Nucleotide ID:NM_001329606Re-query CCDS DB by Protein ID:NP_001316535Link to BLAST:NP_001316535.1
Original member Current member NCBI NM_022048.5 NP_071331.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022048.5Link to Protein Sequence:NP_071331.2Re-query CCDS DB by Nucleotide ID:NM_022048Re-query CCDS DB by Protein ID:NP_071331Link to BLAST:NP_071331.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316535.1 422 Q9HCP0-1 422 100% 0 0
NP_071331.2 422 Q9HCP0-1 422 100% 0 0

Chromosomal Locations for CCDS 10192.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 64171931 64171985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64180348 64180454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64203082 64203189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64204441 64204589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64204865 64204949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64207509 64207594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64213890 64214124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64216562 64216713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64251512 64251581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64259201 64259241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64300319 64300499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGACCATCCTAGTAGGGAAAAGGATGAAAGACAACGGACAACTAAACCCATGGCACAAAGGAGTGCAC
ACTGCTCTCGACCATCTGGCTCCTCATCGTCCTCTGGGGTTCTTATGGTGGGACCCAACTTCAGGGTTGG
CAAGAAGATAGGATGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATCTCTACACCAATGAATATGTA
GCAATCAAACTGGAACCAATAAAATCACGTGCTCCACAGCTTCATTTAGAGTACAGATTTTATAAACAGC
TTGGCAGTGCAGGTGAAGGTCTCCCACAGGTGTATTACTTTGGACCATGTGGGAAATATAATGCCATGGT
GCTGGAGCTCCTTGGCCCTAGCTTGGAGGACTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACG
GTGTTAATGATAGCCATCCAGCTGCTTTCTCGAATGGAATACGTGCACTCAAAGAACCTCATTTACCGAG
ATGTCAAGCCAGAGAACTTCCTGATTGGTCGACAAGGCAATAAGAAAGAGCATGTTATACACATTATAGA
CTTTGGACTGGCCAAGGAATACATTGACCCCGAAACCAAAAAACACATACCTTATAGGGAACACAAAAGT
TTAACTGGAACTGCAAGATATATGTCTATCAACACGCATCTTGGCAAAGAGCAAAGCCGGAGAGATGATT
TGGAAGCCCTAGGCCATATGTTCATGTATTTCCTTCGAGGCAGCCTCCCCTGGCAAGGACTCAAGGCTGA
CACATTAAAAGAGAGATATCAAAAAATTGGTGACACCAAAAGGAATACTCCCATTGAAGCTCTCTGTGAG
AACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGACTGGACTTCTTTGAAAAACCTGATT
ATGAGTATTTACGGACCCTCTTCACAGACCTCTTTGAAAAGAAAGGCTACACCTTTGACTATGCCTATGA
TTGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTGCATCTGCAATAACT
CGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAATCAGGTGGTTAGCTCAA
CCAATGGAGAGCTGAATGTTGATGATCCCACGGGAGCCCACTCCAATGCACCAATCACAGCTCATGCCGA
GGTGGAGGTAGTGGAGGAAGCTAAGTGCTGCTGTTTCTTTAAGAGGAAAAGGAAGAAGACTGCTCAGCGC
CACAAGTGA

Translation (422 aa):
MDHPSREKDERQRTTKPMAQRSAHCSRPSGSSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV
AIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKT
VLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKS
LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCE
NFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGASAIT
RESHTHRDRPSQQQPLRNQVVSSTNGELNVDDPTGAHSNAPITAHAEVEVVEEAKCCCFFKRKRKKTAQR
HK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH