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Report for CCDS9610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9610.1 Public Homo sapiens 14 DCAF11 24 110 108 CCDS HistoryNCBI Gene:80344Re-query CCDS DB by CCDS ID:9610.1Re-query CCDS DB by GeneID:80344See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446197.8 ENSP00000415556.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000446197.8Link to Ensembl Protein Viewer:ENSP00000415556.4Re-query CCDS DB by Nucleotide ID:ENST00000446197Re-query CCDS DB by Protein ID:ENSP00000415556
Original member Current member EBI ENST00000559115.5 ENSP00000452898.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559115.5Link to Ensembl Protein Viewer:ENSP00000452898.1Re-query CCDS DB by Nucleotide ID:ENST00000559115Re-query CCDS DB by Protein ID:ENSP00000452898
Original member Current member NCBI NM_001163484.2 NP_001156956.1 Accepted alive Link to Nucleotide Sequence:NM_001163484.2Link to Protein Sequence:NP_001156956.1Re-query CCDS DB by Nucleotide ID:NM_001163484Re-query CCDS DB by Protein ID:NP_001156956Link to BLAST:NP_001156956.1
Original member Current member NCBI NM_025230.5 NP_079506.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025230.5Link to Protein Sequence:NP_079506.3Re-query CCDS DB by Nucleotide ID:NM_025230Re-query CCDS DB by Protein ID:NP_079506Link to BLAST:NP_079506.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156956.1 546 Q8TEB1-1 546 100% 0 0
NP_079506.3 546 Q8TEB1-1 546 100% 0 0

Chromosomal Locations for CCDS 9610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24115595 24115749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24116917 24117044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24117266 24117393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24117668 24117732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118055 24118155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118388 24118534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24118750 24118804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119145 24119213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119559 24119616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24119711 24119896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24120838 24120991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24121365 24121517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24122971 24123077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24123175 24123309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGGGATCGCGGAACAGCAGCAGTGCAGGATCCGGGTCCGGAGACCCCTCCGAGGGCTTGCCCCGAAGAG
GGGCTGGCCTGCGTCGGAGTGAGGAAGAGGAAGAAGAGGATGAAGATGTGGATCTGGCCCAGGTACTGGC
CTATCTCCTCCGCAGAGGCCAAGTGAGGTTGGTGCAGGGAGGAGGTGCAGCAAATTTACAATTCATTCAG
GCCCTCTTGGACTCAGAGGAAGAGAATGACAGAGCTTGGGATGGTCGTCTTGGGGATCGATACAACCCAC
CTGTGGATGCTACCCCTGACACCCGGGAGCTGGAATTCAATGAGATCAAGACACAAGTGGAACTGGCCAC
AGGGCAGCTGGGGCTTAGGCGGGCCGCCCAGAAGCACAGCTTTCCTCGAATGTTGCACCAGAGAGAACGG
GGCCTCTGCCATCGGGGAAGCTTCTCCCTTGGAGAACAGTCTCGAGTGATATCTCACTTCTTGCCCAATG
ATCTGGGCTTCACTGATAGCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCAAATATT
CATGTCTGCTTGCCAAGACCAGACAATCCGACTCTATGACTGCCGATATGGCCGTTTCCGTAAATTCAAG
AGCATCAAGGCCCGCGACGTAGGCTGGAGCGTCTTGGATGTGGCCTTCACCCCTGATGGGAACCACTTCC
TCTACTCTAGCTGGTCTGATTACATTCATATCTGCAATATCTATGGTGAGGGAGATACACACACTGCCCT
GGATCTCAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATTGCTGTCTCCTCAGATGGACGAGAAGTA
CTAGGAGGGGCCAATGATGGCTGCCTGTATGTCTTTGACCGAGAACAGAACCGGCGCACCCTTCAGATTG
AGTCCCATGAGGATGATGTGAATGCAGTGGCCTTTGCTGATATAAGCTCCCAAATCCTGTTCTCTGGGGG
AGATGATGCCATCTGCAAAGTGTGGGATCGACGCACCATGCGGGAGGATGACCCCAAGCCTGTGGGTGCA
CTGGCTGGACACCAGGATGGCATCACCTTCATTGACAGCAAGGGTGATGCCCGGTATCTGATCTCCAACT
CTAAAGACCAGACCATCAAACTCTGGGATATCCGACGCTTTTCCAGCCGGGAAGGCATGGAAGCTTCACG
CCAGGCTGCCACACAGCAAAACTGGGACTATCGGTGGCAGCAAGTGCCCAAAAAAGCCTGGCGGAAGCTG
AAGCTCCCAGGGGACAGCTCCTTGATGACCTACCGGGGCCACGGAGTGCTGCACACCCTCATCCGCTGCC
GGTTCTCCCCCATTCATAGCACTGGCCAGCAGTTCATCTACAGTGGCTGCTCCACTGGCAAAGTGGTTGT
GTACGACCTTCTAAGTGGCCACATTGTGAAGAAGCTGACCAACCACAAGGCCTGTGTGCGTGACGTCAGT
TGGCACCCCTTTGAAGAGAAGATTGTCAGCAGTTCGTGGGACGGGAACCTGCGTCTGTGGCAGTACCGCC
AGGCTGAGTACTTCCAGGATGACATGCCAGAATCTGAGGAATGTGCCAGCGCCCCTGCCCCAGTGCCCCA
ATCCTCTACACCCTTTTCCTCACCCCAGTAG

Translation (546 aa):
MGSRNSSSAGSGSGDPSEGLPRRGAGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQGGGAANLQFIQ
ALLDSEEENDRAWDGRLGDRYNPPVDATPDTRELEFNEIKTQVELATGQLGLRRAAQKHSFPRMLHQRER
GLCHRGSFSLGEQSRVISHFLPNDLGFTDSYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFK
SIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGREV
LGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGA
LAGHQDGITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKL
KLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVS
WHPFEEKIVSSSWDGNLRLWQYRQAEYFQDDMPESEECASAPAPVPQSSTPFSSPQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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