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Report for CCDS9602.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9602.1 Public Homo sapiens 14 AP1G2 24 110 108 CCDS HistoryNCBI Gene:8906Re-query CCDS DB by CCDS ID:9602.1Re-query CCDS DB by GeneID:8906See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9602.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308724.9 ENSP00000312442.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000308724.9Link to Ensembl Protein Viewer:ENSP00000312442.5Re-query CCDS DB by Nucleotide ID:ENST00000308724Re-query CCDS DB by Protein ID:ENSP00000312442
Original member Current member EBI ENST00000397120.8 ENSP00000380309.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397120.8Link to Ensembl Protein Viewer:ENSP00000380309.3Re-query CCDS DB by Nucleotide ID:ENST00000397120Re-query CCDS DB by Protein ID:ENSP00000380309
Original member Current member NCBI NM_003917.5 NP_003908.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003917.5Link to Protein Sequence:NP_003908.1Re-query CCDS DB by Nucleotide ID:NM_003917Re-query CCDS DB by Protein ID:NP_003908Link to BLAST:NP_003908.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003908.1 785 O75843 785 100% 0 0

Chromosomal Locations for CCDS 9602.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23559749 23559850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23559938 23560036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23560255 23560418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23561296 23561431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23561512 23561635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23561962 23562066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23562288 23562415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23562504 23562593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23563380 23563502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23563584 23563638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23563716 23563856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23564046 23564159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23564333 23564388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23564562 23564660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23565119 23565199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23565606 23565701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23565816 23565892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23566064 23566160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23566278 23566419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23566562 23566686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23567111 23567314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2358 nt):
ATGGTGGTGCCTTCGCTGAAGCTTCAGGACCTCATCGAAGAGATTCGCGGGGCCAAGACTCAGGCCCAGG
AGCGGGAGGTGATCCAAAAGGAGTGTGCCCACATCCGGGCCTCCTTCCGCGACGGGGACCCAGTGCACAG
GCACCGGCAGCTGGCCAAACTGCTCTACGTCCACATGTTGGGCTACCCCGCCCACTTTGGACAGATGGAG
TGCCTGAAACTGATCGCCTCCTCCAGATTCACAGACAAGAGGGTGGGCTACCTGGGGGCCATGCTTCTAT
TGGATGAGAGGCACGATGCCCACCTGCTCATTACCAACAGCATCAAGAATGACCTGAGCCAGGGGATTCA
GCCAGTACAAGGCCTGGCCTTGTGCACTTTGAGCACCATGGGCTCTGCTGAGATGTGCCGAGACCTGGCC
CCAGAGGTGGAGAAACTGCTCCTGCAGCCCAGTCCCTACGTGCGCAAGAAGGCTATTCTGACTGCAGTGC
ACATGATCCGGAAGGTCCCTGAACTCTCCAGTGTCTTCCTCCCACCCTGTGCCCAACTGCTTCATGAGCG
TCACCATGGCATCCTGCTGGGCACCATCACGCTGATCACGGAGCTCTGCGAACGAAGCCCTGCAGCCCTC
AGGCACTTCCGAAAGGTGGTACCCCAGCTGGTACACATCCTCCGGACTCTGGTGACAATGGGATACTCCA
CAGAACACAGCATATCTGGAGTCAGCGACCCCTTCCTGCAGGTCCAGATACTTCGTCTGCTTCGGATCCT
GGGCCGGAACCACGAGGAGAGCAGTGAGACCATGAATGACTTGCTGGCCCAGGTGGCCACTAACACGGAC
ACCAGCCGAAATGCCGGAAATGCGGTCCTGTTTGAGACAGTACTCACCATCATGGATATCCGCTCTGCAG
CTGGCCTACGGGTTCTAGCTGTCAACATTCTTGGTCGCTTCCTACTCAACAGTGACAGGAACATTAGGTA
TGTAGCCCTGACATCACTGCTTCGACTGGTGCAGTCTGATCACAGTGCTGTGCAGCGGCATCGGCCCACT
GTGGTGGAATGTCTACGGGAAACTGATGCCTCCCTCAGCCGGAGAGCCCTGGAACTAAGCCTGGCTCTGG
TAAATAGCTCCAATGTGCGAGCCATGATGCAAGAGCTGCAGGCCTTTCTGGAGTCCTGCCCTCCTGACCT
ACGGGCTGACTGTGCCTCAGGCATCCTGCTGGCTGCAGAGAGGTTTGCTCCAACCAAACGCTGGCACATA
GACACCATCCTGCATGTGCTGACAACGGCGGGCACCCATGTGCGGGATGATGCAGTGGCCAACCTGACCC
AGCTGATTGGGGGGGCCCAGGAGCTACATGCCTACTCTGTGCGCCGCCTCTACAATGCCCTGGCAGAAGA
CATTTCCCAGCAACCACTGGTGCAGGTGGCAGCCTGGTGCATTGGGGAGTATGGGGACCTCCTGCTGGCA
GGGAACTGCGAGGAGATTGAGCCCCTTCAGGTGGACGAAGAGGAAGTGCTGGCATTGCTGGAAAAGGTGC
TGCAGTCCCACATGTCCCTGCCAGCCACTCGAGGATATGCCCTCACAGCCCTCATGAAGCTCAGCACTCG
CCTCTGTGGGGACAACAACCGCATCCGCCAGGTGGTGTCCATCTACGGGAGCTGCTTGGACGTGGAGCTG
CAGCAGCGGGCTGTGGAGTATGACACACTCTTCCGGAAATACGACCACATGAGGGCTGCCATCCTGGAAA
AAATGCCTCTTGTGGAGCGAGATGGCCCTCAGGCTGATGAGGAAGCAAAGGAAAGCAAAGAAGCAGCCCA
GCTTTCAGAAGCAGCCCCAGTGCCCACAGAGCCCCAGGCCTCACAGCTCCTGGATCTGCTAGATCTCCTG
GATGGGGCTTCTGGGGATGTCCAGCATCCTCCCCATCTGGACCCCTCCCCAGGAGGTGCCCTGGTACACC
TGCTTGACCTTCCCTGTGTACCTCCACCCCCAGCTCCCATCCCAGATCTCAAAGTGTTTGAGCGTGAGGG
AGTACAGCTGAATCTGTCTTTCATTCGACCCCCTGAAAACCCTGCTTTGCTGTTAATCACCATCACTGCC
ACCAACTTCTCAGAGGGTGATGTCACCCATTTCATCTGCCAGGCTGCTGTGCCCAAGAGTCTCCAGCTGC
AGCTGCAGGCCCCCAGTGGGAACACAGTTCCAGCTCGGGGTGGCCTTCCTATCACCCAGCTCTTCAGAAT
CCTCAATCCTAACAAGGCCCCCCTGCGGCTAAAGCTGCGCCTCACCTACGACCACTTTCACCAGTCGGTG
CAGGAGATCTTTGAGGTGAACAACTTGCCTGTGGAATCGTGGCAGTAA

Translation (785 aa):
MVVPSLKLQDLIEEIRGAKTQAQEREVIQKECAHIRASFRDGDPVHRHRQLAKLLYVHMLGYPAHFGQME
CLKLIASSRFTDKRVGYLGAMLLLDERHDAHLLITNSIKNDLSQGIQPVQGLALCTLSTMGSAEMCRDLA
PEVEKLLLQPSPYVRKKAILTAVHMIRKVPELSSVFLPPCAQLLHERHHGILLGTITLITELCERSPAAL
RHFRKVVPQLVHILRTLVTMGYSTEHSISGVSDPFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTD
TSRNAGNAVLFETVLTIMDIRSAAGLRVLAVNILGRFLLNSDRNIRYVALTSLLRLVQSDHSAVQRHRPT
VVECLRETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCPPDLRADCASGILLAAERFAPTKRWHI
DTILHVLTTAGTHVRDDAVANLTQLIGGAQELHAYSVRRLYNALAEDISQQPLVQVAAWCIGEYGDLLLA
GNCEEIEPLQVDEEEVLALLEKVLQSHMSLPATRGYALTALMKLSTRLCGDNNRIRQVVSIYGSCLDVEL
QQRAVEYDTLFRKYDHMRAAILEKMPLVERDGPQADEEAKESKEAAQLSEAAPVPTEPQASQLLDLLDLL
DGASGDVQHPPHLDPSPGGALVHLLDLPCVPPPPAPIPDLKVFEREGVQLNLSFIRPPENPALLLITITA
TNFSEGDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSV
QEIFEVNNLPVESWQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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