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Report for CCDS94354.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94354.1 Public Homo sapiens 8 PUF60 24 110 108 CCDS HistoryNCBI Gene:22827Re-query CCDS DB by CCDS ID:94354.1Re-query CCDS DB by GeneID:22827See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94354.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533162.2 ENSP00000433403.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533162.2Link to Ensembl Protein Viewer:ENSP00000433403.2Re-query CCDS DB by Nucleotide ID:ENST00000533162Re-query CCDS DB by Protein ID:ENSP00000433403
Original member Current member EBI ENST00000703847.1 ENSP00000515499.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703847.1Link to Ensembl Protein Viewer:ENSP00000515499.1Re-query CCDS DB by Nucleotide ID:ENST00000703847Re-query CCDS DB by Protein ID:ENSP00000515499
Original member Current member NCBI NM_001362895.2 NP_001349824.1 Accepted alive Link to Nucleotide Sequence:NM_001362895.2Link to Protein Sequence:NP_001349824.1Re-query CCDS DB by Nucleotide ID:NM_001362895Re-query CCDS DB by Protein ID:NP_001349824Link to BLAST:NP_001349824.1
Original member Current member NCBI NM_001362896.2 NP_001349825.1 Accepted alive Link to Nucleotide Sequence:NM_001362896.2Link to Protein Sequence:NP_001349825.1Re-query CCDS DB by Nucleotide ID:NM_001362896Re-query CCDS DB by Protein ID:NP_001349825Link to BLAST:NP_001349825.1

Chromosomal Locations for CCDS 94354.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 143816520 143816819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143816910 143817145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143817331 143817466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143817592 143817782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143817862 143818075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143818193 143818285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143818373 143818534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143820666 143820716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143821597 143821686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143821818 143821913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143824313 143824399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143827385 143827519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGGAGCAGCTGAACTTGGCTGACAGTGGCCTGGTGGGGAAGGAAGCCAGAAGATGCAGAAGGGCCTCCC
CTCCCATGGGCATGCCTTCTGCCTGGTGGCTGCAGAATGAGGCCGGCTGCCTCTTTGCAGCAAGGCAGGT
CAATGGCCAGCAAGGAGGGGGGTCCGAGCCGGCGGCGGCGGCGGCAGTGGTGGCAGCGGGAGACAAATGG
AAACCTCCACAGGGCACAGACTCCATCAAGATGGAGAACGGGCAGAGCACAGCCGCCAAGCTGGGGCTGC
CTCCCCTGACGCCCGAGCAGCAGGAGGCCCTTCAGAAGGCCAAGAAGTACGCCATGGAGCAGAGCATCAA
GAGTGTGCTGGTGAAGCAGACCATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGGCAGCAGTG
ACAATGGGCTTTGGAGATCCTCTCTCACCTTTGCAATCGATGGCGGCTCAGCGGCAGCGGGCGCTGGCCA
TCATGTGCCGCGTCTACGTGGGCTCTATCTACTATGAGCTGGGGGAGGACACCATCCGCCAGGCCTTTGC
CCCCTTTGGCCCCATCAAGAGCATCGACATGTCCTGGGACTCCGTCACCATGAAGCACAAGGGCTTTGCC
TTCGTGGAGTATGAGGTCCCCGAAGCTGCACAGCTGGCCTTGGAGCAGATGAACTCGGTGATGCTGGGGG
GCAGGAACATCAAGGTGGGCAGACCCAGCAACATAGGGCAGGCCCAGCCCATCATAGACCAGTTGGCTGA
GGAGGCACGGGCCTTCAACCGCATCTACGTGGCCTCTGTGCACCAGGACCTCTCAGACGATGACATCAAG
AGCGTGTTTGAGGCCTTTGGCAAGATCAAGTCCTGCACACTGGCCCGGGACCCCACAACTGGCAAGCACA
AGGGCTACGGCTTCATTGAGTACGAGAAGGCCCAGTCGTCCCAAGATGCTGTGTCTTCCATGAACCTCTT
TGACCTGGGTGGCCAGTACTTGCGGGTGGGCAAGGCTGTCACACCGCCCATGCCCCTACTCACACCAGCC
ACGCCTGGAGGCCTCCCACCTGCCGCTGCTGTGGCAGCTGCTGCAGCCACTGCCAAGATCACAGCTCAGG
AAGCAGTGGCCGGAGCAGCGGTGCTGGGTACCCTGGGCACACCTGGACTGGTGTCCCCAGCACTGACCCT
GGCCCAGCCCCTGGGCACTTTGCCCCAGGCTGTCATGGCTGCCCAGGCACCTGGAGTCATCACAGGTGTG
ACCCCAGCCCGTCCTCCTATCCCGGTCACCATCCCCTCGGTGGGAGTGGTGAACCCCATCCTGGCCAGCC
CTCCAACGCTGGGTCTCCTGGAGCCCAAGAAGGAGAAGGAAGAAGAGGAGCTGTTTCCCGAGTCAGAGCG
GCCAGAGATGCTGAGCGAGCAGGAGCACATGAGCATCTCGGGCAGTAGCGCCCGACACATGGTGATGCAG
AAGCTGCTCCGCAAGCAGGAGTCTACAGTGATGGTTCTGCGCAACATGGTGGACCCCAAGGACATCGATG
ATGACCTGGAAGGGGAGGTGACAGAGGAGTGTGGCAAGTTCGGGGCCGTGAACCGCGTCATCATCTACCA
AGAGAAACAAGGCGAGGAGGAGGATGCAGAAATCATTGTCAAGATCTTTGTGGAGTTTTCCATAGCCTCT
GAGACTCATAAGGCCATCCAGGCCCTCAATGGCCGCTGGTTTGCTGGCCGCAAGGTGGTGGCTGAAGTGT
ACGACCAGGAGCGTTTTGATAACAGTGACCTCTCTGCGTGA

Translation (596 aa):
MEQLNLADSGLVGKEARRCRRASPPMGMPSAWWLQNEAGCLFAARQVNGQQGGGSEPAAAAAVVAAGDKW
KPPQGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAV
TMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA
FVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIK
SVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPA
TPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGV
TPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQ
KLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIAS
ETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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