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Report for CCDS94280.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94280.1 Public Homo sapiens 8 UNC5D 24 110 108 CCDS HistoryNCBI Gene:137970Re-query CCDS DB by CCDS ID:94280.1Re-query CCDS DB by GeneID:137970See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94280.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420357.5 ENSP00000392739.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420357.5Link to Ensembl Protein Viewer:ENSP00000392739.1Re-query CCDS DB by Nucleotide ID:ENST00000420357Re-query CCDS DB by Protein ID:ENSP00000392739
Current member NCBI NM_001410918.1 NP_001397847.1 Accepted alive Link to Nucleotide Sequence:NM_001410918.1Link to Protein Sequence:NP_001397847.1Re-query CCDS DB by Nucleotide ID:NM_001410918Re-query CCDS DB by Protein ID:NP_001397847Link to BLAST:NP_001397847.1

Chromosomal Locations for CCDS 94280.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 35235785 35235887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35549292 35549510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35568098 35568241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35595554 35595657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35683547 35683727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35686545 35686709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35722210 35722395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35726152 35726529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35731012 35731096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35748527 35748695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35750582 35750809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35759320 35759469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35766902 35767066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35774299 35774477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35790359 35790563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2661 nt):
ATGGGGAGAGCGGCGGCCACCGCAGGCGGCGGCGGAGGGGCGCGCCGCTGGCTCCCGTGGCTGGGGCTGT
GCTTCTGGGCGGCAGGGACCGCGGCTGCCCGAGGAACTGACAATGGCGAAGCCCTTCCCGAATCCATCCC
ATCAGCTCCTGGGACACTGCCTCATTTCATAGAGGAGCCAGATGATGCTTATATTATCAAGAGCAACCCT
ATTGCACTCAGGTGCAAAGCGAGGCCAGCCATGCAGATATTCTTCAAATGCAACGGCGAGTGGGTCCATC
AGAACGAGCACGTCTCTGAAGAGACTCTGGACGAGAGCTCAGGTTTGAAGGTCCGCGAAGTGTTCATCAA
TGTTACTAGGCAACAGGTGGAGGACTTCCATGGGCCCGAGGACTATTGGTGCCAGTGTGTGGCGTGGAGC
CACCTGGGTACCTCCAAGAGCAGGAAGGCCTCTGTGCGCATAGCCTATTTACGGAAAAACTTTGAACAAG
ACCCACAAGGAAGGGAAGTTCCCATTGAAGGCATGATTGTACTGCACTGCCGCCCACCAGAGGGAGTCCC
TGCTGCCGAGGTGGAATGGCTGAAAAATGAAGAGCCCATTGACTCTGAACAAGACGAGAACATTGACACC
AGGGCTGACCATAACCTGATCATCAGGCAGGCACGGCTCTCGGACTCAGGAAATTACACCTGCATGGCAG
CCAACATCGTGGCTAAGAGGAGAAGCCTGTCGGCCACTGTTGTGGTCTACGTGGATGGGAGCTGGGAAGT
GTGGAGCGAATGGTCCGTCTGCAGTCCAGAGTGTGAACATTTGCGGATCCGGGAGTGCACAGCACCACCC
CCGAGAAATGGGGGCAAATTCTGTGAAGGTCTAAGCCAGGAATCTGAAAACTGCACAGATGGTCTTTGCA
TCCTAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCGGGCTTGGGTGCTGCCGTCGTGGCCGTTGC
AGTCCTGGTCATTGGTGTCACCCTTTACAGACGGAGCCAGAGTGACTATGGCGTGGACGTCATTGACTCT
TCTGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAAAACAGTCCGTCAAGGTAACTCCCTGCTCCTGA
ATTCTGCCATGCAGCCAGATCTGACAGTGAGCCGGACATACAGCGGACCCATCTGTCTGCAGGACCCTCT
GGACAAGGAGCTCATGACAGAGTCCTCACTCTTTAACCCTTTGTCGGACATCAAAGTGAAAGTCCAGAGC
TCGTTCATGGTTTCCCTGGGAGTGTCTGAGAGAGCTGAGTACCACGGCAAGAATCATTCCAGGACTTTTC
CCCATGGAAACAACCACAGCTTTAGTACAATGCATCCCAGAAATAAAATGCCCTACATCCAAAATCTGTC
ATCACTCCCCACAAGGACAGAACTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGGCGCTTAGTAATG
CCAAATACAGGGGTGAGCTTACTCATACCACACGGTGCCATCCCAGAGGAGAATTCTTGGGAGATTTATA
TGTCCATCAACCAAGGTGAACCCAGCCTCCAGTCAGATGGCTCTGAGGTGCTCCTGAGTCCTGAAGTCAC
CTGTGGTCCTCCAGACATGATCGTCACCACTCCCTTTGCATTGACCATCCCGCACTGTGCAGATGTCAGT
TCTGAGCATTGGAATATCCATTTAAAGAAGAGGACACAGCAGGGCAAATGGGAGGAAGTGATGTCAGTGG
AAGATGAATCTACATCCTGTTACTGCCTTTTGGACCCCTTTGCGTGTCATGTGCTCCTGGACAGCTTTGG
GACCTATGCGCTCACTGGAGAGCCAATCACAGACTGTGCCGTGAAGCAACTGAAGGTGGCGGTTTTTGGC
TGCATGTCCTGTAACTCCCTGGATTACAACTTGAGAGTTTACTGTGTGGACAATACCCCTTGTGCATTTC
AGGAAGTGGTTTCAGATGAAAGGCATCAAGGTGGACAGCTCCTGGAAGAACCAAAATTGCTGCATTTCAA
AGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGATATTCCCCCATTCCTCTGGAGAATTAAACCATTC
ACTGCCTGCCAGGAAGTCCCGTTCTCCCGCGTGTGGTGCAGTAACCGGCAGCCCCTGCACTGTGCCTTCT
CCCTGGAGCGTTATACGCCCACTACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCA
TGAACAGATCCTCCAAGTGCAGACATCAATCCTAGAGAGTGAACGAGAAACCATCACTTTCTTCGCACAA
GAGGACAGCACTTTCCCTGCACAGACTGGCCCCAAAGCCTTCAAAATTCCCTACTCCATCAGACAGCGGA
TTTGTGCTACATTTGATACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTTAGCACAGAAAAACAGCAT
CAACAGGAATTTATCTTATTTCGCTACACAAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGGAAGCT
CGTCATCAGCATGATGGTGATCTTGACTCCCTGGCCTGTGCCCTTGAAGAGATTGGGAGGACACACACGA
AACTCTCAAACATTTCAGAATCCCAGCTTGATGAAGCCGACTTCAACTACAGCAGGCAAAATGGACTCTA
G

Translation (886 aa):
MGRAAATAGGGGGARRWLPWLGLCFWAAGTAAARGTDNGEALPESIPSAPGTLPHFIEEPDDAYIIKSNP
IALRCKARPAMQIFFKCNGEWVHQNEHVSEETLDESSGLKVREVFINVTRQQVEDFHGPEDYWCQCVAWS
HLGTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCRPPEGVPAAEVEWLKNEEPIDSEQDENIDT
RADHNLIIRQARLSDSGNYTCMAANIVAKRRSLSATVVVYVDGSWEVWSEWSVCSPECEHLRIRECTAPP
PRNGGKFCEGLSQESENCTDGLCILGIENASDIALYSGLGAAVVAVAVLVIGVTLYRRSQSDYGVDVIDS
SALTGGFQTFNFKTVRQGNSLLLNSAMQPDLTVSRTYSGPICLQDPLDKELMTESSLFNPLSDIKVKVQS
SFMVSLGVSERAEYHGKNHSRTFPHGNNHSFSTMHPRNKMPYIQNLSSLPTRTELRTTGVFGHLGGRLVM
PNTGVSLLIPHGAIPEENSWEIYMSINQGEPSLQSDGSEVLLSPEVTCGPPDMIVTTPFALTIPHCADVS
SEHWNIHLKKRTQQGKWEEVMSVEDESTSCYCLLDPFACHVLLDSFGTYALTGEPITDCAVKQLKVAVFG
CMSCNSLDYNLRVYCVDNTPCAFQEVVSDERHQGGQLLEEPKLLHFKGNTFSLQISVLDIPPFLWRIKPF
TACQEVPFSRVWCSNRQPLHCAFSLERYTPTTTQLSCKICIRQLKGHEQILQVQTSILESERETITFFAQ
EDSTFPAQTGPKAFKIPYSIRQRICATFDTPNAKGKDWQMLAQKNSINRNLSYFATQSSPSAVILNLWEA
RHQHDGDLDSLACALEEIGRTHTKLSNISESQLDEADFNYSRQNGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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