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Report for CCDS93362.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93362.1 Public Homo sapiens 3 KALRN 24 110 108 CCDS HistoryNCBI Gene:8997Re-query CCDS DB by CCDS ID:93362.1Re-query CCDS DB by GeneID:8997See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93362.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682695.1 ENSP00000506956.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682695.1Link to Ensembl Protein Viewer:ENSP00000506956.1Re-query CCDS DB by Nucleotide ID:ENST00000682695Re-query CCDS DB by Protein ID:ENSP00000506956
Original member Current member NCBI NM_001388413.1 NP_001375342.1 Accepted alive Link to Nucleotide Sequence:NM_001388413.1Link to Protein Sequence:NP_001375342.1Re-query CCDS DB by Nucleotide ID:NM_001388413Re-query CCDS DB by Protein ID:NP_001375342Link to BLAST:NP_001375342.1

Chromosomal Locations for CCDS 93362.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 124385004 124385036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124395135 124395343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124398697 124398871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124413470 124413665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124422812 124422978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124430656 124430775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124434307 124434525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124438888 124439037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124441945 124442059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446161 124446276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446763 124446885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124455177 124455359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124456610 124456728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124461890 124461956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124462524 124462633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124474663 124474732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124477245 124477334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124482808 124482900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124488204 124488315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124490694 124490884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124491323 124491424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124492740 124492882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124496311 124496413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124518400 124518462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3069 nt):
ATGTCTGTTTCCTTCCACACACACACCAAAGAGTTGTGGACATGGATGGAAGACCTTCAGAAGGAGATGT
TGGAGGATGTCTGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCAGAC
CGCCACTCTAGATGCCACACTCAATGTCATCAAGGAAGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCG
CCTCCCTCCCTCGGGGAGCCCAGCGAGGCCAGGGACTCGGCTGTGTCCAACAACAAAACACCCCACAGCA
GCTCCATCAGCCACATCGAGTCGGTCCTGCAGCAGCTTGATGATGCCCAGGTGCAGATGGAGGAGCTGTT
CCACGAGCGGAAGATCAAGCTGGACATCTTCCTGCAACTGCGCATCTTTGAGCAGTACACCATCGAGGTG
ACAGCAGAGCTAGACGCCTGGAATGAAGACTTGCTTCGGCAGATGAATGACTTCAACACAGAGGACCTAA
CCCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCTAGCCATGAACAACATGACCTTTGAGGT
TATCCAGCAGGGACAGGATCTGCACCAGTACATCACGGAGGTCCAGGCATCAGGAATTGAGTTGATCTGT
GAAAAAGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGAAT
TGGAGCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCAGTGCCTCCAATTACGTCACCTCCAGGCTGA
AGTCAAACAGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAATGCCAGC
TCTTTGTCGGAAGCAGAGCAGCTGCAGCGGGAGCACGAGCAGTTCCAACTGGCCATCGAGTCCCTCTTTC
ATGCCACTTCCTTGCAGAAGACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCTGCTCCA
GGCCGGCCACTACGATGCCGATGCCATCCGGGAATGTGCTGAGAAGGTGGCCCTCCACTGGCAGCAGCTC
ATGCTGAAGATGGAAGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTTTTACAAAACTTCTGAACAGG
TGTGTAGTGTCCTGGAGAGCTTAGAGCAAGAATACCGGAGAGATGAGGACTGGTGTGGTGGACGAGATAA
GCTGGGGCCAGCAGCAGAGATCGACCATGTCATTCCCCTCATCAGCAAACATTTGGAACAAAAGGAGGCC
TTTCTTAAGGCCTGCACCCTGGCTCGGCGGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAACAACG
TCAGCATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTGAGTGAGCT
CCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAA
TATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTTTACCTCT
CAACACATACCTCCACTGGAGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGAATATGGGGAATTCAG
GGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTTTGTGGAAAAA
GGCCACATTCATGCCACGGAGATAAGGAAATGGGTGACCACGGTGGACAAGCACTACAGAGATTTCTCCC
TGAGGATGGGAAAGTACCGATACTCACTGGAGAAAGCCCTAGGAGTCAACACAGAGGATAATAAGGACCT
GGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAACCACGAAGTC
AATGAAGAGAAGCGGAAGTCAGCCCGGAAGAAAGAATTTATTATGGCTGAACTACTCCAGACAGAGAAGG
CTTATGTAAGGGATTTGCATGAGTGCTTAGAGACCTACCTGTGGGAAATGACCAGTGGTGTGGAGGAGAT
CCCCCCTGGGATCCTCAATAAAGAGCATATCATCTTTGGCAACATCCAAGAGATCTACGATTTCCATAAC
AACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCT
GGGCAGACAAATTTCAGATGTATGTCACCTACTGTAAAAACAAGCCTGATTCCAACCAGCTTATCCTGGA
GCATGCGGGCACCTTCTTTGATGAGATACAACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCTACCTA
ATTAAGCCTGTCCAAAGGATCACCAAATATCAACTGCTCCTGAAGGAACTTTTAACTTGCTGTGAAGAAG
GGAAAGGGGAGCTCAAGGATGGCCTGGAGGTGATGCTCAGTGTCCCAAAGAAAGCCAATGATGCCATGCA
TGTCAGCATGCTGGAAGGGTTCGACGAGAACCTGGATGTGCAGGGGGAGTTGATTCTCCAGGATGCCTTT
CAAGTGTGGGACCCGAAGTCGCTGATCCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGAGATCTCCT
TGGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACACACGAAATATGTTTACAAGAACAAGCTACTGAC
CTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACC
CCATCCTCAGACAATAAAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCAGGAGTGGATCAAGAACA
TTCGAGAAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAGCTTTAAAGGAGCCACTTCAGCTCCCCAA
AACACCAGCCAAACAGAGGAACAATAGTAAGAGGGATGGAGTGGAGGATATTGACAGCCAGGGGGATGGG
AGCAGCCAACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAGGATG
GCAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGATCCTTTCTCCACTTACGTTTAG

Translation (1022 aa):
MSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSA
PPSLGEPSEARDSAVSNNKTPHSSSISHIESVLQQLDDAQVQMEELFHERKIKLDIFLQLRIFEQYTIEV
TAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELIC
EKDIDLAAQVQELLEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWIRNGESMLNASLVNAS
SLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAIRECAEKVALHWQQL
MLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYRRDEDWCGGRDKLGPAAEIDHVIPLISKHLEQKEA
FLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSELLQRENRVLHFWTLKKRRLDQCQQ
YVVFERSAKQALDWIQETGEFYLSTHTSTGETTEETQELLKEYGEFRVPAKQTKEKVKLLIQLADSFVEK
GHIHATEIRKWVTTVDKHYRDFSLRMGKYRYSLEKALGVNTEDNKDLELDIIPASLSDREVKLRDANHEV
NEEKRKSARKKEFIMAELLQTEKAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHN
NIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSNQLILEHAGTFFDEIQQRHGLANSISSYL
IKPVQRITKYQLLLKELLTCCEEGKGELKDGLEVMLSVPKKANDAMHVSMLEGFDENLDVQGELILQDAF
QVWDPKSLIRKGRERHLFLFEISLVFSKEIKDSSGHTKYVYKNKLLTSELGVTEHVEGDPCKFALWSGRT
PSSDNKTVLKASNIETKQEWIKNIREVIQERIIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDG
SSQPDTISIASRTSQNTVDSDKDGNLVPRWHLGPGDPFSTYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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