NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92608.1 Public Homo sapiens 19 DPF1 24 110 108 CCDS HistoryNCBI Gene:8193Re-query CCDS DB by CCDS ID:92608.1Re-query CCDS DB by GeneID:8193See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 92608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614244.4 ENSP00000483226.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614244.4Link to Ensembl Protein Viewer:ENSP00000483226.1Re-query CCDS DB by Nucleotide ID:ENST00000614244Re-query CCDS DB by Protein ID:ENSP00000483226
Original member Current member NCBI NM_001289978.2 NP_001276907.2 Accepted alive Link to Nucleotide Sequence:NM_001289978.2Link to Protein Sequence:NP_001276907.2Re-query CCDS DB by Nucleotide ID:NM_001289978Re-query CCDS DB by Protein ID:NP_001276907Link to BLAST:NP_001276907.2

Chromosomal Locations for CCDS 92608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38212063 38212133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38212280 38212391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38213644 38213756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38216140 38216259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38216353 38216403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38217460 38217591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38217798 38217876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38218573 38218662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38218931 38219058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38222357 38222464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38222548 38222708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38224114 38224142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGGCCACTGTCATCCCTGGCCCCCTGAGCCTAGGCGAGGACTTCTACCGCGAGGCCATCGAGCACTGCC
GCAGTTACAACGCGCGCCTGTGCGCCGAGCGCAGCCTGCGACTGCCCTTCCTCGACTCGCAGACCGGCGT
GGCCCAGAACAACTGCTACATCTGGATGGAGAAGACCCACCGCGGGCCGGGTTTGGCCCCGGGACAGATT
TACACGTACCCCGCCCGCTGTTGGAGGAAGAAACGGAGACTCAACATCCTGGAGGACCCCAGACTCAGGC
CCTGCGAGTACAAGATCGACTGTGAAGCACCCCTGAAGAAGGAGGGTGGCCTCCCGGAAGGGCCGGTCCT
CGAGGCTCTACTGTGTGCAGAGACGGGGGAGAAGAAGATTGAGCTGAAGGAGGAGGAGACCATTATGGAC
TGTCAGAAACAGCAGTTGCTGGAGTTTCCGCATGACCTCGAGGTGGAAGACTTGGAGGATGACATTCCCA
GGAGGAAGAACAGGGCCAAAGGAAAGGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTC
CCTGGAGGACCGAGACAAGCCGTATGTCTGTGATATCTGTGGGAAACGGTATAAGAACCGGCCGGGGCTC
AGCTACCACTACACCCACACCCACCTGGCCGAGGAGGAGGGGGAGGAGAACGCCGAACGCCACGCCCTGC
CCTTCCACCGGAAAAACAACCATAAACAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAA
ACACACAGCCAAGAAGGCGCCCGACGGCACTGTCATCCCCAACGGCTACTGTGACTTCTGCCTGGGGGGC
TCCAAGAAGACGGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACTGTGGGCGATCAGGACACCCCTCGT
GTTTACAATTCACGGTGAACATGACGGCAGCCGTGCGGACCTACCGCTGGCAGTGCATCGAGTGCAAATC
CTGCAGCCTGTGCGGAACCTCCGAGAACGACGGTGCCAGCTGGGCGGGTCTCACCCCCCAGGACCAGCTG
CTGTTTTGTGATGACTGCGATCGGGGTTACCACATGTACTGCCTGAGTCCCCCCATGGCGGAGCCCCCGG
AAGGGAGCTGGAGCTGTCACCTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGCTTACATCACCCTCAC
CTAG

Translation (397 aa):
MATVIPGPLSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQI
YTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGPVLEALLCAETGEKKIELKEEETIMD
CQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGL
SYHYTHTHLAEEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPDGTVIPNGYCDFCLGG
SKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDGASWAGLTPQDQL
LFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH