CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS92161.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
92161.1 |
Public |
Homo sapiens |
16 |
CHD9 |
24 |
110 |
108 |
|
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 92161.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000565803.2 |
ENSP00000457355.2 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001352156.3 |
NP_001339085.1 |
|
Accepted |
alive |
|
Chromosomal Locations for CCDS 92161.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7275 nt): ATGTCTTCAGTGAAGAGGCCAAGAGGAAGGCCTCCATCTTCCAAGAAGAGCGATGGTTCTGGGACATATA CTAAGTTGCAGAATACCCAGGTGAGGGTCATGTCTGAGAAGAAGCAGAGAAAAAAGGTGGAATCAGAAAG CAAGCAAGAAAAGGCTAATCGTATAATATCAGAGGCCATAGCAAAAGCAAAGGAGCGTGGGGAACGCAAT ATTCCACGAGTAATGAGCCCTGAAAACTTTCCTACTGCTTCAGTTGAAGGAAAAGAGGAAAAGAAAGGTA GAAGGATGAAATCCAAGCCAAAGGACAAAGACAGCAAAAAAACAAAAACATGTTCTAAGTTAAAAGAGAA GACAAAAATTGGCAAACTCATTATTACATTGGGTAAGAAACAAAAAAGAAAGAATGAGTCTTCAGATGAA ATATCTGATGCAGAACAGATGCCACAGCATACATTAAAAGATCAAGACTCTCAAAAAAGAAGATCAAATC GACAAATTAAAAGAAAAAAATACGCAGAAGATATAGAAGGGAAGCAATCTGAAGAAGAGGTTAAAGGTTC TATGAAAATAAAAAAGAATTCAGCTCCTTTACCTGGTGAACAGCCTTTACAATTGTTTGTGGAGAATCCG AGTGAAGAAGATGCTGCAATTGTAGACAAAATTCTATCTTCTAGAACCGTAAAAAAGGAAATATCACCTG GAGTGATGATTGATACAGAAGAATTTTTTGTAAAATACAAGAATTACTCCTATCTTCACTGTGAGTGGGC CACAGAAGAGCAGCTTTTGAAAGATAAAAGGATCCAGCAGAAAATCAAACGATTCAAATTGAGACAAGCA CAAAGAGCACATTTTTTTGCAGACATGGAAGAAGAACCATTTAACCCAGACTACGTTGAAGTAGACAGAG TATTAGAAGTCTCTTTTTGTGAAGATAAGGATACTGGTGAGCCTGTTATTTACTACTTAGTAAAATGGTG CTCATTGCCATATGAAGATAGTACTTGGGAACTAAAAGAAGATGTAGATCTTGCAAAAATAGAAGAGTTT GAACAACTGCAAGCTTCAAGGCCTGACACAAGACGTTTGGACCGTCCTCCTTCTAATATTTGGAAGAAAA TAGATCAATCCAGGGACTATAAAAATGGCAATCAACTCAGGGAATATCAACTGGAAGGACTCAACTGGCT CTTGTTCAATTGGTACAATAGACGAAACTGCATCTTAGCAGATGAAATGGGTCTTGGCAAAACTATTCAA TCAATTACATTCCTCTATGAAATCCTTCTGACTGGTATAAGAGGACCTTTCCTGATTATTGCTCCACTTT CTACTATTGCAAACTGGGAGAGAGAATTTCGTACGTGGACTGATATTAACGTTGTGGTTTATCATGGGAG CCTGATTAGCAGACAAATGATACAGCAATACGAGATGTACTTCAGGGATTCACAGGGGCGTATCATTCGA GGAGCTTACAGATTCCAAGCCATCATCACCACTTTTGAAATGATTCTTGGAGGCTGTGGAGAGCTTAATG CAATTGAATGGCGATGTGTGATTATTGATGAAGCACATAGGTTAAAAAATAAAAATTGTAAACTCTTAGA GGGCCTGAAACTCATGAATCTGGAACACAAGGTGCTTTTGACTGGCACCCCTCTCCAAAATACAGTTGAA GAACTATTTAGTCTTCTTCACTTTCTTGAACCCTTAAGGTTTCCTTCTGAATCAACATTTATGCAAGAAT TTGGGGATCTGAAAACAGAGGAACAGGTACAGAAACTTCAGGCTATCCTGAAACCAATGATGTTGAGACG ATTAAAAGAAGATGTGGAAAAGAAGTTGGCACCTAAAGAAGAAACCATCATTGAAGTAGAACTTACTAAT ATTCAAAAGAAATACTACCGGGCTATCTTGGAAAAGAACTTTTCTTTTTTATCCAAAGGAGCAGGACAAA CTAATGTACCTAACTTGGTCAATACCATGATGGAGCTCAGGAAATGTTGTAATCATCCATATCTTATAAA AGGTGCTGAGGAGAAAATACTTGGAGAATTTAGAGATACTTACAATCCAGCTGCTTCTGATTTTCATCTT CAAGCAATGATCCAGTCTGCTGGTAAATTGGTCCTTATTGATAAATTGCTTCCCAAAATGAAAGCCGGAG GTCATAAAGTGCTCATCTTCTCTCAAATGGTTCGTTGCCTTGACATTCTGGAGGACTATCTCATACATAA AAGATACTTATATGAGCGAATTGATGGCAGAGTCAGAGGAAATCTTCGGCAAGCTGCTATAGATAGATTT AGTAAACCTGATTCAGATAGATTTGTTTTTCTCCTGTGTACCCGAGCTGGTGGGTTGGGCATCAACTTAA CTGCAGCTGATACATGTATAATTTTTGATTCTGATTGGAATCCTCAGAATGATCTTCAGGCCCAAGCTCG TTGCCACAGAATTGGTCAGAACAAAGCAGTTAAAGTCTACAGACTGGTAACTCGTAACTCATATGAGAGA GAGATGTTTGACCGAGCCAGTTTGAAACTGGGCCTAGATAAAGCTGTGTTACAGAGCATGAGTGGAAGAG AAAGTAATGTTGGTGGTATTCAGCAGCTTTCCAAAAAGGAAATAGAAGATCTGCTTCGAAGAGGTGCTTA TGGTGCTATTATGGAGGAAGAAGATGAAGGCTCTAAATTCTGCGAAGAGGATATCGATCAGATTTTACTA CGTCGTACAAAAACTATTACAATTGAATCAGAAGGACGTGGGTCAACATTTGCCAAGGCGAGTTTTGTGG CATCTGGAAACCGGACAGATATTTCTTTAGATGATCCCAACTTCTGGCAAAAATGGGCTAAAAAGGCAGA AATAGATATAGAGGCCATCAGTGGCAGAAACAGCTTGGTTATTGACACTCCAAGAATTAGGAAGCAAACA AGACCTTTTAGTGCCACAAAAGATGAATTGGCTGAATTATCTGAAGCTGAAAGTGAAGGAGATGAAAAGC CCAAACTCCGGAGACCCTGTGACCGTTCCAATGGCTATGGAAGAACTGAATGCTTTAGAGTTGAGAAAAA CCTGCTAGTTTATGGGTGGGGCCGATGGAGAGAGATTCTATCTCATGGCCGTTTCAAAAGGCAGCTAAAT GAACACGATGTAGAGATAATTTGCCGAGCTCTCTTAGCATATTGCCTTGTTCACTACCGAGGAGATGAGA AGATTAAAGGTTTCATATGGGATCTCATTACTCCAACTGAAGATGGACAGACACGAGAGCTACAGAATCA TCTAGGCCTATCAGCTCCTGTACCCAGGGGTCGAAAAGGGAAGAAAGTAAAAACTCAAACAAGCTCATTT GATATACAAAAAGCAGAATGGCTTCGAAAATATAATCCCGAGCAGCTCCTTCAAGATGAAGGCTACAAAA AACATATAAAACACCACTGTAATAAGGTTTTGCTTCGTGTGAGAATGCTGTATTATCTAAAGCAAGAAGT TATTGGAAATGAGTGTCAGAAAGTATTTGATGGAGTTGATGCAAGTGACATTGATGTTTGGGTACCAGAA CCAGACCACTCAGAAGTTCCTGCTGAGTGGTGGGATTTTGATGCTGATAAGTCACTCCTTATTGGAGTTT TTAAACATGGATATGAAAAATATAACACTATTCGAGCAGACCCAGCATTATGCTTCTTGGAAAGAGTGGG AAAACCTGATGAGAAAGCAGTTGCTGCTGAACAGAGAGCGAATGATTATATGGATGGGGATGTGGAAGAT CCAGAATACAAACCTGCCCCAGCCATCTTTAAAGATGATATAGAGGATGATGTTTCCTCACCAGGAGATC TTGTTATAGCAGATGGAGATGGTCAACTGATGGAGGGTGATAAAGTATATTGGCCTACTCAATCAGCTTT AACCACACGTTTGAGGCGTCTCATCACTGCATACCAGCGTACTAATAAAAACAGACAAATTCAGCAGATA CAACCGACTTTCTCGGTGCCTACCAGTGTAATGCAGCCTATTTATGAGGAAGCCACTCTTAATCCTAAAA TGGCAGCCAAGATAGAAAGACAGCAAAGATGGACAAGAAGAGAAGAAGCTGACTTTTATAGGGTTGTATC TACATTTGGAGTGGTTTTTGACCCTGACAGAGGCCAATTTGATTGGACAAAATTTAGAGCTATGGCTAGG CTACATAAGAAAACTGATGATAGTTTGGAAAAATATTTGTACGCATTCATGTCCATGTGTCGGAGGGTTT GTCGTCTTCCTTCCAAAGAAGAATTGGTGGATCCAAATATTTTTATCCAGCCCATCACAGAAGAACGTGC TTCTAGGACTTTGTATCGCATTGAACTTCTAAGGAAAGTACGGGAACAGGCCCTTCGACATCCACAGTTG TTTGAACGCTTGAAGCTTTGCCATCCAAATCCAGATTTACCAGTCTGGTGGGAATGTGGCCCTCATGATA GGGATTTGCTTATTGGTGCTGCCAAACACGGGGTGAGCCGAACAGACTATCACATTCTTCGTGATCCTGA ACTCTCATTTATGGCAGCTCAGAGGAACTACAGTCAAAGTAAGATGGCTCATTCAAGGACTTCTACCCCA CTTCTACAGCAATATCAAGTAGCACTTTCTGCTTCTCCTCTTACCTCTCTACCTAGGCTCCTAGATGCTA AAGGTATTATTCTAGAGGAGATGAAAGTTAAAAGTGAAAACCTTAAAGAGGAGCCTCAGTCTTCTGAAGA AGAATCTATGTCTTCTGTGGAAACCAGGACACTAATAAAATCTGAGCCTGTAAGTCCAAAGAATGGTGTT TTACCACAGGCTACTGGAGACCAGAAATCTGGTGGAAAATGTGAAACAGACAGACGCATGGTTGCAGCCA GAACAGAACCCCTAACTCCAAACCCAGCTTCTAAGAAACCAAGAGTCCACAAAAGGGGATCAGAATCTAG TTCTGATTCTGACTCAGATTCTGAGAGATCATCTTGTTCTTCCAGATCATCTTCTTCCTCATCATCCTCT TCTTGCTCCCACTCTCGATCAGGCTCTAGTTCTTCTTCATCTTCATCTTGTTCTTCAGCATCTTCTTCAT CCTCTTCCTCCACCTCTTCCTCCTCCTCCTCCTCTTCATCTTCATCAGAAGAAAGTGACAGTGATGAAGA AGAAGCCCAAAAACGAGCAGAAAGTACTACTCACATGAAAGCCTATGATGAAGAAAGCGTCGCGTCACTG AGCACTACCCAGGATGAGACTCAGGATAGTTTTCAGATGAACAATGGGACACCAGAGTCTGCTTATATCT TACAAGGTGGATATATGCTGGCAGCCTCGTATTGGCCAAAGGATCGTGTGATGATCAATAGGTTGGACAG TATTTGTCAAACAGTTCTGAAAGGAAAGTGGCCTTCAGCTAGAAGAAGTTATGATGCTAACACAGTGGCT TCTTTCTATACCACAAAACTGCTGGACAGCCCTGGAGCAGCTACAGAATACAGCGATCCCAGTGTACCCA CTCCCCCAGGTGCCGGTGTTAAAGAAGAACATGATCAGTCAACACAGATGTCAAAGGTGAAGAAGCATGT ACGAGAAAAGGAGTTTACAGTGAAAATCAAAGACGAAGGTGGTTTGAAGTTGACATTTCAGAAGCAAGGG CTTGCTCAGAAAAGACCATTTGATGGTGAAGACGGTGCTCTGGGGCAGCAGCAGTACCTCACTCGGCTTC GAGAGCTTCAAAGTGCATCAGAGACCAGCCTCGTCAATTTCCCAAAATCCATACCAGTATCAGGTACTTC CATTCAACCAACCCTTGGTGCCAATGGTGTGATATTAGACAACCAGCCTATAGTCAAAAAAAGGCGAGGA AGGAGGAAGAATGTAGAAGGTGTTGACATCTTCTTTTTTAACAGAAATAAACCACCTAATCATGTTTCTT TAGGCTTAACCTCCTCACAGATTTCCACAGGGATAAATCCAGCACTATCCTATACTCAACCTCAAGGAAT TCCTGATACAGAAAGTCCAGTTCCAGTTATTAATCTTAAAGATGGAACGAGACTTGCAGGAGATGATGCA CCAAAGAGAAAGGATTTGGAAAAATGGCTTAAGGAGCACCCGGGTTATGTGGAAGATTTGGGAGCTTTTA TTCCTAGAATGCAGCTTCATGAGGGAAGACCCAAACAAAAAAGACACCGTTGCAGAAACCCCAATAAACT AGATGTGAATAGTCTCACTGGAGAAGAACGTGTTCAACTGATTAACAGAAGAAATGCTAGAAAGGTTGGA GGTGCATTTGCTCCCCCTTTGAAAGATTTATGTAGATTCCTAAAAGAAAATTCAGAATATGGAGTAGCTC CTGAATGGGGAGATGTTGTTAAGCAATCTGGATTTCTTCCAGAAAGCATGTATGAACGTATTCTCACTGG TCCCGTTGTGAGAGAGGAAGTAAGCAGGCGGGGGAGACGGCCTAAAAGTGGAATTGCAAAGGCCACAGCA GCAGCAGCTGCTGCATCTGCCACCAGTGTTTCAGGCAATCCTTTGTTAGCCAATGGACTACTTCCAGGTG TGGATCTCACAACTCTTCAGGCCTTACAACAAAACCTACAAAACTTGCAGTCACTGCAAGTAACTGCTGG GTTGATGGGAATGCCTACCGGCCTTCCTTCTGGAGGAGAAGCTAAAAACATGGCTGCTATGTTCCCCATG CTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTGGGCATGGGAGGACTCCTGACAAAGCCTACGGAAT CTGGGACAGAAGACAAAAAGGGAAGTGACTCTAAGGAGTCAGAAGGAAAAACAGAAAGGACAGAGAGCCA AAGTTCAGAGAATGGTGGAGAAAACTCTGTGTCAAGTTCTCCTTCCACATCCTCTACTGCTGCATTAAAT ACAGCTGCAGCTGCCAACCCATTAGCTCTTAACCCACTATTACTATCTAATATACTTTATCCAGGGATGC TTCTCACTCCAGGCCTTAATCTTCATATTCCAACTTTGTCCCAGTCCAATACTTTTGATGTACAAAACAA AAACAGTGACTTAGGCTCGTCTAAGTCTGTAGAAGTAAAAGAAGAAGATTCCAGAATTAAAGATCAGGAA GACAAAGGAGGAACTGAACCAAGTCCTCTCAATGAAAACAGCACAGATGAGGGTTCAGAGAAAGCTGATG CTTCATCTGGATCTGATAGTACATCGTCGTCATCTGAGGATTCAGATTCTAGTAATGAAGACTGA
Translation (2424 aa): MSSVKRPRGRPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKERGERN IPRVMSPENFPTASVEGKEEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLIITLGKKQKRKNESSDE ISDAEQMPQHTLKDQDSQKRRSNRQIKRKKYAEDIEGKQSEEEVKGSMKIKKNSAPLPGEQPLQLFVENP SEEDAAIVDKILSSRTVKKEISPGVMIDTEEFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQA QRAHFFADMEEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEF EQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQ SITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIR GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE ELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTN IQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHL QAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRF SKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYER EMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILL RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSLVIDTPRIRKQT RPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLN EHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSF DIQKAEWLRKYNPEQLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPE PDHSEVPAEWWDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVED PEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQIQQI QPTFSVPTSVMQPIYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFDWTKFRAMAR LHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQL FERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTP LLQQYQVALSASPLTSLPRLLDAKGIILEEMKVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGV LPQATGDQKSGGKCETDRRMVAARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSS SCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRAESTTHMKAYDEESVASL STTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDANTVA SFYTTKLLDSPGAATEYSDPSVPTPPGAGVKEEHDQSTQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQG LAQKRPFDGEDGALGQQQYLTRLRELQSASETSLVNFPKSIPVSGTSIQPTLGANGVILDNQPIVKKRRG RRKNVEGVDIFFFNRNKPPNHVSLGLTSSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDA PKRKDLEKWLKEHPGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVG GAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKATA AAAAASATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPTGLPSGGEAKNMAAMFPM LLSGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKESEGKTERTESQSSENGGENSVSSSPSTSSTAALN TAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQNKNSDLGSSKSVEVKEEDSRIKDQE DKGGTEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNED
|