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Report for CCDS92157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92157.1 Public Homo sapiens 16 ZNF423 24 110 108 CCDS HistoryNCBI Gene:23090Re-query CCDS DB by CCDS ID:92157.1Re-query CCDS DB by GeneID:23090See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563137.7 ENSP00000455588.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000563137.7Link to Ensembl Protein Viewer:ENSP00000455588.3Re-query CCDS DB by Nucleotide ID:ENST00000563137Re-query CCDS DB by Protein ID:ENSP00000455588
Original member Current member NCBI NM_001379286.1 NP_001366215.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001379286.1Link to Protein Sequence:NP_001366215.1Re-query CCDS DB by Nucleotide ID:NM_001379286Re-query CCDS DB by Protein ID:NP_001366215Link to BLAST:NP_001366215.1

Chromosomal Locations for CCDS 92157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 49491275 49491304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49523624 49523739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49525363 49525494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49626170 49626254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49635660 49638874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49730771 49730971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49789487 49789546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49855735 49855774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3879 nt):
ATGTCCAGGCGGAAGCAGGCGAAGCCGCGCTCGGTGAAAGTTGAAGAGGGGGAGGCCTCAGACTTCTCGC
TGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAG
CCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGACATGGAG
GATGAATCAATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACC
GGGCCCACCGCTGTCCTGGAGATGGTGATGACGACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAG
CAAGGATGTTGCGTCACCCACGCAGATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGGAAGGG
GGCACGGGCCTGCCATACCCTTGCCAGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACTTGAAGAGGC
ACGAGCAGATCCACAGCGACAAGCTGCCGTTCAAGTGCACCTACTGCAGCCGCCTCTTCAAGCACAAGAG
GAGCCGTGACCGGCACATCAAGCTGCATACGGGCGACAAGAAGTATCACTGCCACGAGTGCGAGGCAGCC
TTCTCCCGCAGCGACCACCTCAAGATCCACCTGAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTG
TGTGCAAGCGCGGCTTCTCCTCCACCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGA
GCATCTGGCCAAGTCGGAGAAGGAAGCCAAGAAGGACGACTTCATGTGCGACTACTGCGAGGACACCTTC
AGCCAGACGGAGGAGCTGGAGAAGCACGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGCGGACCTGC
AGTGCATTCACTGCCCTGAGGTCTTCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGC
CAACCAGAAACACAAGTGCCCCATGTGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTACTGCCACCTG
GACAGCCACCGGCAGCCCGACTCCAGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGTGGCCT
CCATGAGCAGCGCCACACCCGACTCCAGCGCCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCTTGAA
GCCGCTGCGGGGGCAGAAGAAGATGCGGGATGACGGGCAGGGCTGGACCAAGGTGGTCTATAGCTGCCCC
TATTGTTCCAAGCGGGACTTTAACAGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATCCACGCGGACA
AGCCCCAGCAGAGCCACACATGTCAGATCTGCCTGGACTCCATGCCCACCCTCTACAACCTCAACGAGCA
CGTTCGCAAGCTGCACAAGAACCATGCCTACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCCACTGC
AACTACTGCCCCGAGATGTTCGCCGACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCC
CCAACGCCAACCCCTCTGACGGTAATAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTTCCTTACTGA
GTCCTCCCTCACCGAGCACATCCAGCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTG
GTGCAGCCCACGCAGTCCTTCATGGAGGTCTATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTGGCT
CCATCCTGAAACTCACCAAGCACATCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTC
CAAGGCCGAGCAGAGCCCAGTCTCGTCCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCA
AGCGCCAACTCCATCTCCAATGGGGAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGA
GCTTCCAGACCCACCTGAAGCTGCACCTGGAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGCAAAGA
GGACTTTGACTCCCAGGAGTCCCTCCTGCAGCACCTGACAGTGCATTACATGACCACGTCGACCCACTAT
GTGTGCGAGAGCTGCGACAAGCAATTTTCCTCGGTGGATGACCTGCAGAAGCACCTGCTGGACATGCACA
CCTTTGTGTTGTACCACTGCACCCTGTGTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGGTGCACCT
GGCGGTGAAGCACAGCAATGAGAAGAAGATGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCAAGGAG
GCTGACCTGCAGGTGCACGTCAAACACAGCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCT
GTGGGGAGACCTTCAGCACCGAGGTGGAGCTGCAGTGCCACATCACCACACACAGCAAGAAGTATAACTG
TAAGTTCTGCAGCAAGGCCTTCCACGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTG
TTTGATGCTGCGACCGAGAACGGCACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTG
CTGACCTGCAGGGCATGCTGCTTAAGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGT
GGACGCGTCGGAGCCCATGTACGGCTGTGACATCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGCAG
AATCACCGGCTGCGGGACCACAATATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTA
TCAAGGGCAGTCACAAGTGCAACGTTTGTTCACGGACTTTCTTCTCGGAGAACGGGCTACGGGAGCACCT
GCAGACGCACCGGGGCCCTGCCAAGCACTACATGTGTCCCATCTGTGGTGAGCGCTTCCCTTCGCTGCTG
ACGCTCACCGAACACAAGGTGACCCACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCAAGATGC
CCCTGCAGAGCGAGGAGGAGTTTATTGAGCACTGCCAGATGCACCCTGACCTGCGCAACTCACTCACGGG
CTTCCGCTGTGTGGTCTGCATGCAGACAGTCACTTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCAC
ATGCAGAAGCTGGCGGGCAGCTCAGCGGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCTCTACAAGT
GCGCCCTGTGCCTCAAGGAGTTCCGCAGCAAGCAGGACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTA
CGGCCTCTGCGCCGGCTGCATGGCCCGCAGCGCCAACGGACAGGTGGGTGGCCTGGCCCCGCCCGAGCCC
GCCGACCGGCCCTGTGCCGGCCTCCGTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGAAGACCTGG
AGAGCCACATGCAGGTGGACCACCGTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGGCACCCAGAC
ATCGCCAGTGCCCCGGAAAAAGACATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAG
ATCCAAATCCACGTTGCCAACCACATGATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTGCAACCAGA
TGTTCGACTCCCCGGCCAAGCTCCTCTGTCACCTCATTGAGCACAGCTTCGAGGGCATGGGCGGCACCTT
CAAATGCCCCGTGTGTTTCACAGTCTTCGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCAC
GGGCAGGAGGACAAGATCTACGACTGCTCACAGTGCCCTCAGAAGTTCTTCTTCCAGACCGAGCTGCAGA
ACCACACGATGAGCCAGCACGCACAGTGA

Translation (1292 aa):
MSRRKQAKPRSVKVEEGEASDFSLAWDSSVTAAGGLEGEPECDQKTSRALEDRNSVTSQEERNEDDEDME
DESIYTCDHCQQDFESLADLTDHRAHRCPGDGDDDPQLSWVASSPSSKDVASPTQMIGDGCDLGLGEEEG
GTGLPYPCQFCDKSFIRLSYLKRHEQIHSDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCHECEAA
FSRSDHLKIHLKTHSSSKPFKCTVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDTF
SQTEELEKHVLTRHPQLSEKADLQCIHCPEVFVDENTLLAHIHQAHANQKHKCPMCPEQFSSVEGVYCHL
DSHRQPDSSNHSVSPDPVLGSVASMSSATPDSSASVERGSTPDSTLKPLRGQKKMRDDGQGWTKVVYSCP
YCSKRDFNSLAVLEIHLKTIHADKPQQSHTCQICLDSMPTLYNLNEHVRKLHKNHAYPVMQFGNISAFHC
NYCPEMFADINSLQEHIRVSHCGPNANPSDGNNAFFCNQCSMGFLTESSLTEHIQQAHCSVGSAKLESPV
VQPTQSFMEVYSCPYCTNSPIFGSILKLTKHIKENHKNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSA
SANSISNGEYPCNQCDLKFSNFESFQTHLKLHLELLLRKQACPQCKEDFDSQESLLQHLTVHYMTTSTHY
VCESCDKQFSSVDDLQKHLLDMHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKMYRCTACNWDFRKE
ADLQVHVKHSHLGNPAKAHKCIFCGETFSTEVELQCHITTHSKKYNCKFCSKAFHAIILLEKHLREKHCV
FDAATENGTANGVPPMATKKAEPADLQGMLLKNPEAPNSHEASEDDVDASEPMYGCDICGAAYTMEVLLQ
NHRLRDHNIRPGEDDGSRKKAEFIKGSHKCNVCSRTFFSENGLREHLQTHRGPAKHYMCPICGERFPSLL
TLTEHKVTHSKSLDTGTCRICKMPLQSEEEFIEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFH
MQKLAGSSAASSPNGQGLQKLYKCALCLKEFRSKQDLVKLDVNGLPYGLCAGCMARSANGQVGGLAPPEP
ADRPCAGLRCPECSVKFESAEDLESHMQVDHRDLTPETSGPRKGTQTSPVPRKKTYQCIKCQMTFENERE
IQIHVANHMIEEGINHECKLCNQMFDSPAKLLCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFAVH
GQEDKIYDCSQCPQKFFFQTELQNHTMSQHAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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