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Report for CCDS87307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87307.1 Public Homo sapiens 5 PDE8B 24 110 108 CCDS HistoryNCBI Gene:8622Re-query CCDS DB by CCDS ID:87307.1Re-query CCDS DB by GeneID:8622See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000646262.1 ENSP00000493971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646262.1Link to Ensembl Protein Viewer:ENSP00000493971.1Re-query CCDS DB by Nucleotide ID:ENST00000646262Re-query CCDS DB by Protein ID:ENSP00000493971
Original member Current member NCBI NM_001349753.2 NP_001336682.1 Accepted alive Link to Nucleotide Sequence:NM_001349753.2Link to Protein Sequence:NP_001336682.1Re-query CCDS DB by Nucleotide ID:NM_001349753Re-query CCDS DB by Protein ID:NP_001336682Link to BLAST:NP_001336682.1
Original member Current member NCBI NM_001376067.1 NP_001362996.1 Accepted alive Link to Nucleotide Sequence:NM_001376067.1Link to Protein Sequence:NP_001362996.1Re-query CCDS DB by Nucleotide ID:NM_001376067Re-query CCDS DB by Protein ID:NP_001362996Link to BLAST:NP_001362996.1
Original member Current member NCBI NM_001376068.1 NP_001362997.1 Accepted alive Link to Nucleotide Sequence:NM_001376068.1Link to Protein Sequence:NP_001362997.1Re-query CCDS DB by Nucleotide ID:NM_001376068Re-query CCDS DB by Protein ID:NP_001362997Link to BLAST:NP_001362997.1

Chromosomal Locations for CCDS 87307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 77312027 77312053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77325539 77325729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77328998 77329057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77331402 77331459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77337227 77337315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77344853 77344931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77349419 77349559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77351065 77351153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77353346 77353406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77400248 77400290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77404720 77404797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77407381 77407457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77408893 77409057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77411676 77411721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77412100 77412235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77413111 77413309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77418229 77418446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77419767 77419887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77421821 77421988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77425767 77425896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 77426445 77426554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2286 nt):
ATGAGACTGACGCAGGACCCTATTCAGGTTTTGCTGATCTTTGCAAAGGAAGATAGTCAGAGCGATGGCT
TCTGGTGGGCCTGCGACAGAGCTGGTTATAGATGCAATATTGCTCGGACTCCAGAGTCAGCCCTTGAATG
CTTTCTTGATAAGCATCATGAAATTATTGTAATTGATCATAGACAAACTCAGAACTTCGATGCAGAAGCA
GTGTGCAGGTCGATCCGGGCCACAAATCCCTCCGAGCACACGGTGATCCTCGCAGTGGTTTCGCGAGTAT
CGGATGACCATGAAGAGGCGTCAGTCCTTCCTCTTCTCCACGCAGGCTTCAACAGGAGATTTATGGAGAA
TAGCAGCATAATTGCTTGCTATAATGAACTGATTCAAATAGAACATGGGGAAGTTCGCTCCCAGTTCAAA
TTACGGGCCTGTAATTCAGTGTTTACAGCATTAGATCACTGTCATGAAGCCATAGAAATAACAAGCGATG
ACCACGTGATTCAGTATGTCAACCCAGCCTTCGAAAGGATGATGGGCTACCACAAAGGTGAGCTCCTGGG
AAAAGAACTCGCTGATCTGCCCAAAAGCGATAAGAACCGGGCAGACCTTCTCGACACCATCAATACATGC
ATCAAGAAGGGAAAGGAGTGGCAGGGGGTTTACTATGCCAGACGGAAATCCGGGGACAGCATCCAACAGC
ACGTGAAGATCACCCCAGTGATTGGCCAAGGAGGGAAAATTAGGCATTTTGTCTCGCTCAAGAAACTGTG
TTGTACCACTGACAATAATAAGCAGATTCACAAGATTCATCGTGATTCAGGAGACAATTCTCAGACAGAG
CCTCATTCATTCAGATATAAGAACAGGAGGAAAGAGTCCATTGACGTGAAATCGATATCATCTCGAGGCA
GTGATGCACCAAGCCTGCAGAATCGTCGCTATCCGTCCATGGCGAGGATCCACTCCATGACCATCGAGGC
TCCCATCACAAAGGTTATAAATATAATCAATGCAGCCCAAGAAAACAGCCCAGTCACAGTAGCGGAAGCC
TTGGACAGAGTTCTAGAGATTTTACGGACCACAGAACTGTACTCCCCTCAGCTGGGTACCAAAGATGAAG
ATCCCCACACCAGTGATCTTGTTGGAGGCCTGATGACTGACGGCTTGAGAAGACTGTCAGGAAACGAGTA
TGTGTTTACTAAGAATGTGCACCAGAGTCACAGTCACCTTGCAATGCCAATAACCATCAATGATGTTCCC
CCTTGTATCTCTCAATTACTTGATAATGAGGAGAGTTGGGACTTCAACATCTTTGAATTGGAAGCCATTA
CGCATAAAAGGCCATTGGTTTATCTGGGCTTAAAGGTCTTCTCTCGGTTTGGAGTATGTGAATTTTTAAA
CTGTTCTGAAACCACTCTTCGGGCCTGGTTCCAAGTGATCGAAGCCAACTACCACTCTTCCAATGCCTAC
CACAACTCCACCCATGCTGCCGACGTCCTGCACGCCACCGCTTTCTTTCTTGGAAAGGAAAGAGTAAAGG
GAAGCCTCGATCAGTTGGATGAGGTGGCAGCCCTCATTGCTGCCACAGTCCATGACGTGGATCACCCGGG
AAGGACCAACTCTTTCCTCTGCAATGCAGGCAGTGAGCTTGCTGTGCTCTACAATGACACTGCTGTTCTG
GAGAGTCACCACACCGCCCTGGCCTTCCAGCTCACGGTCAAGGACACCAAATGCAACATTTTCAAGAATA
TTGACAGGAACCATTATCGAACGCTGCGCCAGGCTATTATTGACATGGTTTTGGCAACAGAGATGACAAA
ACACTTTGAACATGTGAATAAGTTTGTGAACAGCATCAACAAGCCAATGGCAGCTGAGATTGAAGGCAGC
GACTGTGAATGCAACCCTGCTGGGAAGAACTTCCCTGAAAACCAAATCCTGATCAAACGCATGATGATTA
AGTGTGCTGACGTGGCCAACCCATGCCGCCCCTTGGACCTGTGCATTGAATGGGCTGGGAGGATCTCTGA
GGAGTATTTTGCACAGACTGATGAAGAGAAGAGACAGGGACTACCTGTGGTGATGCCAGTGTTTGACCGG
AATACCTGTAGCATCCCCAAGTCTCAGATCTCTTTCATTGACTACTTCATAACAGACATGTTTGATGCTT
GGGATGCCTTTGCACATCTGCCAGCCCTGATGCAACATTTGGCTGACAACTACAAACACTGGAAGACACT
AGATGACCTAAAGTGCAAAAGTTTGAGGCTTCCATCTGACAGCTAA

Translation (761 aa):
MRLTQDPIQVLLIFAKEDSQSDGFWWACDRAGYRCNIARTPESALECFLDKHHEIIVIDHRQTQNFDAEA
VCRSIRATNPSEHTVILAVVSRVSDDHEEASVLPLLHAGFNRRFMENSSIIACYNELIQIEHGEVRSQFK
LRACNSVFTALDHCHEAIEITSDDHVIQYVNPAFERMMGYHKGELLGKELADLPKSDKNRADLLDTINTC
IKKGKEWQGVYYARRKSGDSIQQHVKITPVIGQGGKIRHFVSLKKLCCTTDNNKQIHKIHRDSGDNSQTE
PHSFRYKNRRKESIDVKSISSRGSDAPSLQNRRYPSMARIHSMTIEAPITKVINIINAAQENSPVTVAEA
LDRVLEILRTTELYSPQLGTKDEDPHTSDLVGGLMTDGLRRLSGNEYVFTKNVHQSHSHLAMPITINDVP
PCISQLLDNEESWDFNIFELEAITHKRPLVYLGLKVFSRFGVCEFLNCSETTLRAWFQVIEANYHSSNAY
HNSTHAADVLHATAFFLGKERVKGSLDQLDEVAALIAATVHDVDHPGRTNSFLCNAGSELAVLYNDTAVL
ESHHTALAFQLTVKDTKCNIFKNIDRNHYRTLRQAIIDMVLATEMTKHFEHVNKFVNSINKPMAAEIEGS
DCECNPAGKNFPENQILIKRMMIKCADVANPCRPLDLCIEWAGRISEEYFAQTDEEKRQGLPVVMPVFDR
NTCSIPKSQISFIDYFITDMFDAWDAFAHLPALMQHLADNYKHWKTLDDLKCKSLRLPSDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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