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Report for CCDS85026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85026.1 Public Mus musculus 6 Tmem209 23 108 98 CCDS HistoryNCBI Gene:72649Re-query CCDS DB by CCDS ID:85026.1Re-query CCDS DB by GeneID:72649See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85026.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000151187.7 ENSMUSP00000138232.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000151187.7Link to Ensembl Protein Viewer:ENSMUSP00000138232.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000151187Re-query CCDS DB by Protein ID:ENSMUSP00000138232
Original member Current member EBI ENSMUST00000222934.1 ENSMUSP00000152560.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000222934.1Link to Ensembl Protein Viewer:ENSMUSP00000152560.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000222934Re-query CCDS DB by Protein ID:ENSMUSP00000152560
Original member Current member NCBI NM_001347087.1 NP_001334016.1 Accepted alive Link to Nucleotide Sequence:NM_001347087.1Link to Protein Sequence:NP_001334016.1Re-query CCDS DB by Nucleotide ID:NM_001347087Re-query CCDS DB by Protein ID:NP_001334016Link to BLAST:NP_001334016.1

Chromosomal Locations for CCDS 85026.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30482931 30482985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30487375 30487448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30489293 30489390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30489476 30489590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30491087 30491184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30492597 30492722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30494738 30494834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30497167 30497238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30497818 30497993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30501901 30502102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30505733 30505831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGACTGGGTATAGCCCTCAACTGCAAGGCCTGTCGTCAGGAGGCCTTGGCTCTTACAGCCCTGGTGTGA
CTTACTCGCCTGTCAGTGGCTACAATAAGTTGGCCAGCTTTAGTCTGTCTCCTTCTTCTCCATACCCTAC
CACTGTGGGCCCAGTGGAGAGCAGTGGATTGAGAGCTCGCTACCGTTCTCCACCCACGGTCTACAACTCA
CCCACTGACAAAGAGGACTACATGACAGACCTGAGAACTTTGGACACGTTCCTTAGAAGTGAGGAAGAGA
AACAGCATAGAGTGAAGCTGGGGAGCCCAGATTCCACCTCTCCTTCTACCAGCCCTACCTTCTGGAATTA
CAGTCGTTCTGTGGGTGATTATGCACAAACCTTAAAGAAGTTTCAGTATCAGCTTGCCTGTAGATCACAG
GCCCCATGTGCTAACAAAGATGAAGCCGATCTCATTTCTAAGCAAGCTGCAGAAGAGGTCTGGGCAAGAG
TGACTATGAATAGACAGCTTCTCGATCACATGGATTCATGGACAGCCAAGTTTAGAAATTGGATCAGTGA
GACAATATTGGTGCCGCTTGTGCAAGAGATTGAGTCTGTCAGCACCCAGATGAGAAGGATGGGCTGTCCA
GAGCTACAAATAGGAGAGGCGAGTGTTACCAGCTTGAAGCAAGCTGCCCTGGTCAGAGCTCCTCTCATTC
CAACTCTGAATGCAATTGTGCAGTATTTAGACCTCACACCAAATCAGGAGTACTTGTTTGAAAGAATCAA
AGAACTTTCTCAGGGGGGCTGTATGAGTTCATTCAGATGGAACAGAGGTGGAGACTTCAAAGGACGCAAA
TGGGATACAGACCTGCCCACTGATTCTGCTATCATCATGCATGTGTTTTGCACCTACCTTGATTCCAGAT
TACCTCCACACCCTAAGTACCCTGATGGAAAAACATTCACTTCTCAGCACTTCGTTCAGACGCCAAATAA
ACCAGATGTTACGAATGAAAATGTGTTTTGTATTTATCAGAGTGCTGTCAACCCTCCACATTATGAGCTA
ATCTATCAGCGGCATGTCTACAATCTTCCAAAGGGCAGGAATAATATGTTTCATACGTTGCTGATGTTCC
TTTATATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGAGTTAACCTTGGGCTCTCTGGCGTGAACAT
TTTGTGGATCTTTGGAGAGTAG

Translation (403 aa):
MTGYSPQLQGLSSGGLGSYSPGVTYSPVSGYNKLASFSLSPSSPYPTTVGPVESSGLRARYRSPPTVYNS
PTDKEDYMTDLRTLDTFLRSEEEKQHRVKLGSPDSTSPSTSPTFWNYSRSVGDYAQTLKKFQYQLACRSQ
APCANKDEADLISKQAAEEVWARVTMNRQLLDHMDSWTAKFRNWISETILVPLVQEIESVSTQMRRMGCP
ELQIGEASVTSLKQAALVRAPLIPTLNAIVQYLDLTPNQEYLFERIKELSQGGCMSSFRWNRGGDFKGRK
WDTDLPTDSAIIMHVFCTYLDSRLPPHPKYPDGKTFTSQHFVQTPNKPDVTNENVFCIYQSAVNPPHYEL
IYQRHVYNLPKGRNNMFHTLLMFLYIIKTKESGMLGRVNLGLSGVNILWIFGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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